Pairwise Alignments

Query, 317 a.a., integrase/recombinase XerD from Paraburkholderia bryophila 376MFSha3.1

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score =  323 bits (828), Expect = 3e-93
 Identities = 173/291 (59%), Positives = 206/291 (70%), Gaps = 3/291 (1%)

Query: 29  IDAFCDALWLEHGLSRNTLDAYRRDLRLFSEWLAQTRNASLDTASEADLNAYSAAR--QK 86
           ID F DALWLE GLS NT  +YR DL LF+ WL Q  + SL  A    +  + A R  Q 
Sbjct: 9   IDQFLDALWLEKGLSDNTRVSYRSDLALFNGWL-QEHSVSLPDAGRDLILDHLAWRLDQG 67

Query: 87  DKSTSANRRLSVFRRYYGWAVREHRAKVDPTLRIRSAKQPPRFPSTLSEAQVEALLGAPD 146
            K  S  R LS  R ++ + +RE    +DPTL++   +     P +LSEA VEALL APD
Sbjct: 68  YKPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVEALLQAPD 127

Query: 147 IETALGLRDRTMLELMYASGLRVTELVTLKTVEVGLNEGVVRVMGKGSKERLIPFGEEAH 206
           +  A+G RDR MLE++YA GLRVTELV+L   +V L +GV+RVMGKGSKERL+P GEEA 
Sbjct: 128 LGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKERLVPMGEEAV 187

Query: 207 GWIERYLRDARPALLGPRAADALFVTSRAEGMTRQQFWNIIKRHAAVAGVHAPLSPHTLR 266
            W+ERY RD R  LL  R +D LF + R E MTRQ FW+ IK HA VAG+  PLSPHTLR
Sbjct: 188 VWLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGIDKPLSPHTLR 247

Query: 267 HAFATHLLNHGADLRVVQLLLGHTDISTTQIYTHVARERLKSLHAQHHPRG 317
           HAFATHLLNHGADLRVVQ+LLGH+D+STTQIYTHVA+ RL+ LHAQHHPRG
Sbjct: 248 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPRG 298