Pairwise Alignments

Query, 317 a.a., integrase/recombinase XerD from Paraburkholderia bryophila 376MFSha3.1

Subject, 298 a.a., site-specific tyrosine recombinase from Escherichia coli BL21

 Score =  312 bits (800), Expect = 6e-90
 Identities = 168/293 (57%), Positives = 206/293 (70%), Gaps = 4/293 (1%)

Query: 27  ASIDAFCDALWLEHGLSRNTLDAYRRDLRLFSEWLAQTRNASLDTASEADLNAYSAARQK 86
           A I+ F DALWLE  L+ NTL+AYRRDL +  EWL   R  +L TA   DL A  A R +
Sbjct: 6   ARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHH-RGLTLATAQSDDLQALLAERLE 64

Query: 87  D--KSTSANRRLSVFRRYYGWAVREHRAKVDPTLRIRSAKQPPRFPSTLSEAQVEALLGA 144
              K+TS+ R LS  RR + +  RE   + DP+  + S K P R P  LSEAQVE LL A
Sbjct: 65  GGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQA 124

Query: 145 PDIETALGLRDRTMLELMYASGLRVTELVTLKTVEVGLNEGVVRVMGKGSKERLIPFGEE 204
           P I+  L LRD+ MLE++YA+GLRV+ELV L   ++ L +GVVRV+GKG+KERL+P GEE
Sbjct: 125 PLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEE 184

Query: 205 AHGWIERYLRDARPALLGPRAADALFVTSRAEGMTRQQFWNIIKRHAAVAGVHA-PLSPH 263
           A  W+E YL   RP LL   + D LF + RA+ MTRQ FW+ IK +A +AG+ +  LSPH
Sbjct: 185 AVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPH 244

Query: 264 TLRHAFATHLLNHGADLRVVQLLLGHTDISTTQIYTHVARERLKSLHAQHHPR 316
            LRHAFATHLLNHGADLRVVQ+LLGH+D+STTQIYTHVA ERL+ LH QHHPR
Sbjct: 245 VLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPR 297