Pairwise Alignments

Query, 490 a.a., circadian clock protein KaiC from Paraburkholderia bryophila 376MFSha3.1

Subject, 499 a.a., circadian clock protein KaiC from Pseudomonas simiae WCS417

 Score =  161 bits (407), Expect = 6e-44
 Identities = 140/482 (29%), Positives = 215/482 (44%), Gaps = 33/482 (6%)

Query: 6   SQTSLRANVDTGVPGLDEILGGGLVRGGVYLLEGMAGAGKTILSSQIGFHRVSRGEKVLY 65
           S   L     TG+ GLD+IL GGL R  ++LLEG  G GKT ++          GE  LY
Sbjct: 4   SNELLSEKAATGIEGLDDILAGGLSRSHLFLLEGEPGTGKTTVALHFLQAGAKNGETSLY 63

Query: 66  MTLI---------AESHDKLL---AHLKRLTFFDE--NAVAQQMLFVSGYHELMQDGLDG 111
           +TL          A SH   L    H+  LT  +   NA  QQ L  S   EL +     
Sbjct: 64  ITLSETERELRQGATSHGWDLDDNIHIFELTPPESLLNAEHQQSLLYSSDLELGEA---- 119

Query: 112 FLKLIASSIYDYRPSLMIIDGFRSAREFSETELSLSKFIHELNALAAAMDCTTLLLAPLS 171
             + I   +   +P+ +++D     R  +++ L   + I  +       D T LLL  L+
Sbjct: 120 -TRQIFEVVERVKPTRVVVDSLSEIRLLAQSSLRYRRQILAIKHYFVRYDATVLLLDDLT 178

Query: 172 GNE-PHPEHTLVDGLIELNRFSDGM-RRAREIEVHKLRARNHLMGKHYFRIAESGLLMYP 229
                   H++  G+I L   +       R + V K R + +  G H F I + G+ ++P
Sbjct: 179 TESLDKTVHSVAHGVIRLEELTPNYGAERRRVRVVKYRGQKYRGGFHDFTIMQGGVHVFP 238

Query: 230 RLESQCAPSSGPVDLKTRISFGLPHLDIMFGGGLSQGSTTTLIGPSGVGKTMLCLQFLAA 289
           RL +  A   G  + +T  S G+  LD + GGG+  GS++ ++GP+G GK+++ + F AA
Sbjct: 239 RLVA--AEHRGGYNRQTLTS-GIRELDALLGGGIETGSSSLILGPAGTGKSLISMIFAAA 295

Query: 290 GVANGERCLYLGSYEGPQRLLGKAEAVSIPLNDAYQDGRLAIQWQPAIELAVDEIAANAL 349
            VA GE+       E    L  + + + I L      G L I+   A EL   E +    
Sbjct: 296 AVARGEKAALFIFDEELGLLFERMKNMGIDLAALQATGNLFIEQVDAAELTPGEFSHRVR 355

Query: 350 ATAREIGATRMVIDGVEGFRDSALRVERFGLFLNALLHQLREAGITALITEEMPLYPDHG 409
               E G   +VID + G++ +        L ++ LL  L   G    +T        HG
Sbjct: 356 RCVDERGIKTVVIDSINGYQAAMPEENALILHMHELLLYLNRRGAATFMT-----VAQHG 410

Query: 410 NSRSSR----VSALTENLVLLRYAETEAGLRRAISIVKQRESAHDPSTHELVISSHGLDV 465
                +    ++ L + ++LLRY E    +RRAISI+K+R   H+ +  E  I S G+ V
Sbjct: 411 LVGDMQAPVDITYLADTVILLRYFEAIGEVRRAISIIKKRTGTHESTIREYRIGSRGMTV 470

Query: 466 IE 467
            E
Sbjct: 471 GE 472