Pairwise Alignments

Query, 1544 a.a., ATP dependent helicase, Lhr family from Paraburkholderia bryophila 376MFSha3.1

Subject, 826 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score =  203 bits (517), Expect = 5e-56
 Identities = 177/592 (29%), Positives = 269/592 (45%), Gaps = 54/592 (9%)

Query: 56  WFLKSFPAPTDAQAAAWPQIRQGRSTLVAAPTGSGKTLTAFLSALDD--LVQQGLANNGA 113
           WF      P   Q   W  ++ G+S L+ A TG+GKT   + +AL+   + +  +     
Sbjct: 11  WFAAKGWKPFAFQKEVWAAVKSGQSGLLHASTGAGKTYALWFAALNRFAIARPPVTAKRK 70

Query: 114 LPDETL-VVYVSPLKALSNDIRLNLQVPLQGIAAELDARGLPPLDIRTAVRTGDTTQQER 172
            P E L V++++P++AL+ D    L+ PL+ +           +     +RTGDT+  ER
Sbjct: 71  PPAEPLTVLWITPMRALAADTARALEAPLEALQ----------IPWSVGLRTGDTSSSER 120

Query: 173 NALKKRAPHILVSTPESLYVLLGSDSGRRMLCTVRTVIVDEIHALAGSKRGSHLALSLER 232
               +R P +LV+TPESL ++L        L  +R V+VDE H L G+KRG  L L+L R
Sbjct: 121 ARQTRRQPTVLVTTPESLTLMLARADSEVSLAHLRMVVVDEWHELIGNKRGVQLQLALAR 180

Query: 233 LDALCGRRLPRI---GLSATQKPVSAVARFLV---GGAPVDSDIPADCAIIDVGHIRERD 286
           L     R  P +   G+SAT    +     LV    G  V     A   IID        
Sbjct: 181 LR----RWHPDLMVWGISATLGNQAHALEVLVPQGDGINVQGQT-AKQLIIDT------- 228

Query: 287 LALEIPPVPLEAVMPNEVWERVYDRLAELVALHSTTLIFVNTRRMAERAARHLTERLGKD 346
               +PPV         +  ++  ++   V   S+ L+F NTR  +E   + L +     
Sbjct: 229 ---LLPPVTERFPWAGHIGLKMLPQVVAEVDASSSCLVFTNTRAQSEIWFQALLDARPDW 285

Query: 347 A--VAAHHGSLAKEHRFDAEQRLKRGELRVLIATASLELGIDIGDVDLVCQMGSPRAIAP 404
           A  +A HHGSL++E R   E+ LK G+L+ ++ T+SL+LG+D   V+ V Q+GS + +A 
Sbjct: 286 AGVIALHHGSLSRETRDWVERALKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVAR 345

Query: 405 FLQRVGRSGHHVGGMPKGRLFPTSRDDLIECAALLDCVRRGELDALRIPRAPLDVLAQQI 464
            +QR GRSGH  G   +  L PT   +L+E AA  D + +  ++A   P  PLDVL Q +
Sbjct: 346 LMQRAGRSGHAPGRPSRVTLVPTHSLELVEAAAAQDAIAQRRIEARESPYKPLDVLVQHL 405

Query: 465 VAEVSSTEWSEDALFDLIRRAAPYAELAREQYDAVLRMLAEGYTS--------RNGPRAA 516
           V+      +  D L   +R A  Y +L  E +   L  +  G  S        R  P   
Sbjct: 406 VSMALGGGYKPDDLLVEVRGAWAYHDLTDEDWAWALGFVRHGGLSLTAYPDYRRVEPDEH 465

Query: 517 YIHRDVVSGTLRGRRGGKLVAVTSGGTIPENADYAVVLEPQ---AVNIGTVNEDFAVESL 573
            I R   +   R  R        S GTI  +A   +    +     N+G+V E F     
Sbjct: 466 GIWRVPDARLARRHR-------MSVGTIVSDASIHLKFWSKGGGGKNLGSVEEGFIARLK 518

Query: 574 AGDVFQLGNASYRILRIESGRVRVEDAQGQPPNIPFWLGEAPGRSDELSFGV 625
            GD F        ++R+E+    V  +  +   +P W G     S+EL+  V
Sbjct: 519 PGDGFLFAGRLLELVRVENMTAYVRRSNAKKAAVPRWNGGRMPLSNELAQAV 570