Pairwise Alignments
Query, 1544 a.a., ATP dependent helicase, Lhr family from Paraburkholderia bryophila 376MFSha3.1
Subject, 1538 a.a., putative ATP-dependent helicase from Escherichia coli BL21
Score = 604 bits (1557), Expect = e-176
Identities = 494/1576 (31%), Positives = 721/1576 (45%), Gaps = 226/1576 (14%)
Query: 49 FHPAVAGWFLKSFPAPTDAQAAAWPQIRQGRSTLVAAPTGSGKTLTAFLSALDDLVQQGL 108
F PA WFL++F PT Q W + LV APTGSGKTL AFL ALD L ++G
Sbjct: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74
Query: 109 ANNGALPDE--TLVVYVSPLKALSNDIRLNLQVPLQGIAAELDARGLPPLDIRTAVRTGD 166
+ + ++Y+SP+KAL D++ NLQ+PL+GIA E RG +++R +RTGD
Sbjct: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134
Query: 167 TTQQERNALKKRAPHILVSTPESLYVLLGSDSGRRMLCTVRTVIVDEIHALAGSKRGSHL 226
T QER+ L + P IL++TPESLY++L S R L V TVI+DE+HA+AGSKRG+HL
Sbjct: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193
Query: 227 ALSLERLDALCGRRLPRIGLSATQKPVSAVARFLVGGAPVDSDIPADCAIIDVGHIRERD 286
ALSLERLDAL RIGLSAT + S VA FL G PV +++ +R
Sbjct: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPV--------TVVNPPAMRHPQ 245
Query: 287 LALEIPPVPLEAV--------------MPNEVWERVYDRLAELVALHSTTLIFVNTRRMA 332
+ + +P ++ V +W + + + V H +T++F N+R +A
Sbjct: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305
Query: 333 ERAARHLTE----------RLGKDA---------------------VAAHHGSLAKEHRF 361
E+ L E + DA +HHGS++KE R
Sbjct: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365
Query: 362 DAEQRLKRGELRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGHHVGGMPK 421
EQ LK GELR ++AT+SLELGID+G VDLV Q+ +P ++A LQR+GR+GH VGG+ K
Sbjct: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425
Query: 422 GRLFPTSRDDLIECAALLDCVRRGELDALRIPRAPLDVLAQQIVAEVSSTEWSEDALFDL 481
G FP +R DL++ A +++C+ G L+ L P PLDVLAQQ VA + D +
Sbjct: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485
Query: 482 IRRAAPYAELAREQYDAVLRMLAEGYTSRNGPRAAYIHRDV---VSGTLRGRRGGKLVAV 538
+RRAAP+ +L R +DA L ML+ Y S G +A+ + V +G L R G +L+AV
Sbjct: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGAQLLAV 543
Query: 539 TSGGTIPENADYAVVL-----EPQAVNIGTVNEDFAVESLAGDVFQLGNASYRILRIESG 593
TSGGTIP+ Y+V+L + + +G ++E+ ES D+ LG S+RI +I
Sbjct: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603
Query: 594 RVRVEDAQGQPPNIPFWLGEAPGRSDELSFGVARLREQIARLLASGDDATTPLDNAQASD 653
+V V A G+ +PFW GE GR EL + LLA G
Sbjct: 604 QVIVTPAPGRSARLPFWRGEGNGRPAEL----GEMIGDFLHLLADG-------------- 645
Query: 654 TASKATASEYVPDATAEAPNPMPARLERAIDWLIAELGLDEAAARQIVDYLARARAALGV 713
A S +P WL +E I + R A G+
Sbjct: 646 ----AFFSGTIP------------------PWL-----AEENTIANIQGLIEEQRNATGI 678
Query: 714 LPTQDTLVMERFFDESGGTQLVVHAPFGSRVNRAWGLALRKRFCRQFNFELQAAATEDAI 773
+P LV+ER DE G ++++H+P+G RV+ W LA+ R + + A++D I
Sbjct: 679 VPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWALAIAGRIHALWGADASVVASDDGI 738
Query: 774 VLSLTGSHSFVLDEVWRYLHSNSAERLLIQALLDAPLFGVRWRWNATTALGLPRYTGGRK 833
V + + + D +++ +A+ + LF R+R A AL +P T G +
Sbjct: 739 VARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHR 798
Query: 834 TAPQLQRMRSEDLLTSVFPEQAACLENVVGERELPHHPLVDQTVDDCLHDAMDSERWLAL 893
T QR+R+ LL + P P++ +T+ +CL D D L
Sbjct: 799 TPLWQQRLRASQLLEIA--------------QGYPDFPVILETLRECLQDVYDLPALERL 844
Query: 894 LRRMENGDVRLVARDLPAPSPLAAEIL--NAKPYAYLDDAPIEERRTQAV-----LNRRW 946
+RR+ G++++ PSP A +L + Y DAP+ ERR + L R
Sbjct: 845 MRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904
Query: 947 TDPASADDLGALDADAIASVRDE-----AWPQARSIDEMHEALTGLACIT-EAEAQHNEG 1000
+L LD I V +E +A+ + + + L L +T E AQ + G
Sbjct: 905 LGQVDPGEL--LDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTG 962
Query: 1001 WPEWLASLARSGRATRIEIAADAALWLPAERLTCFDALYRSRNSGTTNSGPRFTPPLTAP 1060
E +AS + A + A+ ERL C D R R++ G R P + P
Sbjct: 963 SSEEVASYLENLLAVK---RIFPAMISGQERLACMDDAARLRDA----LGVRL--PESLP 1013
Query: 1061 KGYTDEWSADDALLDVLRARLTGFGPLPADAIADALKLPRTSVEQALGRLEAEGYVMRGR 1120
+ Y S L D+ L + A+ +A L VE+ L +L +G VM
Sbjct: 1014 EIYLHRVSY--PLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM--- 1068
Query: 1121 FTPNTSEEEWCERHLLARIHRYTVKRLRREIEPVERHDFMRFLFEWQHLTPDTRS----- 1175
N ++ W + R+ +++ R PV + R L E Q + P T
Sbjct: 1069 ---NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALF 1125
Query: 1176 --------EGRDALAAVLEQMEGFEAAASAWEEDILPARVKAYSNTSLDELCRSGKIVWT 1227
EG D + V+EQ+ G AS WE ILPARV+ YS+ LDEL +G ++W+
Sbjct: 1126 ASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWS 1185
Query: 1228 RLTERSRSAAGPVRSTPIVLLPRPQVRTWSALIDAERQPELSARAQSVYDALSQHGAMFF 1287
+ +V L + S Q SA Q++ L+ GA F
Sbjct: 1186 GQKKLGEDDG-------LVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFA 1238
Query: 1288 DELLHELR------VLRIELESALGELVAAGLVNSDSFAGLRALLKPAAK-RNAYSGSRR 1340
++ +R V L+ AL LV G++ SD +A LRAL + ++ R + S R
Sbjct: 1239 QQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHR 1298
Query: 1341 ARSSMGLGA-------LIGGMDDAGRWALVNRRASIATSEETAAQPGRPQQQRRRQLPAE 1393
AR + A + AGRW+L+ P R L
Sbjct: 1299 ARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQ---------------VEPLNDTERMLA-- 1341
Query: 1394 TLEHVAMTLLRRYGVVFWR--VLEREADWLPPWRDLLRVYQRLEARGVIRGGRFVNGLAG 1451
+A +L RYG++ + + E P + L R +E G I GRFV GL G
Sbjct: 1342 ----LAENMLDRYGIISRQAVIAENIPGGFPSMQTLCR---SMEDSGRIMRGRFVEGLGG 1394
Query: 1452 EQFALPEAIPLLREVRRHANDGAF---VCVGGTDPLNLVGTLLVGERVPAV------AGN 1502
QFA I LR++ A V + DP N+ G LL PA AG
Sbjct: 1395 AQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGA 1454
Query: 1503 RVLYRDGVVIATLAAG 1518
V+ G ++ LA G
Sbjct: 1455 LVVVSGGKLLLYLAQG 1470