Pairwise Alignments

Query, 313 a.a., monosaccharide ABC transporter substrate-binding protein, CUT2 family from Paraburkholderia bryophila 376MFSha3.1

Subject, 340 a.a., autoinducer 2-binding protein from Escherichia coli BL21

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 6   RFTASALVALAASVGATAHAKDAKDISVAVIPK-VAVPFFDDCNKGAKTAAGKAGVKYQW 64
           RF   AL+++      + + + A+ I  A IPK V V FF     GA+ A  + GV   +
Sbjct: 5   RFKKIALLSVLGIAAISMNVQAAERI--AFIPKLVGVGFFTSGGNGAQQAGKELGVDVTY 62

Query: 65  VVPQNTQGSTQVQIIEDLISRHVDGIAISVNEPKSVESVMKRAEQSGIKVLTYDSDSPRS 124
             P     S QVQ+I + +++  + I +S   P  +   +KRA Q G++VLT+DSD+   
Sbjct: 63  DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPE 122

Query: 125 GRSMYIGTNN-EQAGATMAETMGKALN-GQGEVAIITGQLGAVNLNERIAGIKKGLAK-Y 181
            RS YI      Q G  + +   + +N  + +VA         + N+ +   K  +AK +
Sbjct: 123 CRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH 182

Query: 182 PGIKIVETQGTDDDLARGVSVVETTLRAHPQLKGIFGVSQVGGPAVAK 229
           PG +IV TQ   +D  + +   E  L+A+  L  I        PA A+
Sbjct: 183 PGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQ 230