Pairwise Alignments

Query, 334 a.a., transcriptional regulator, LacI family from Paraburkholderia bryophila 376MFSha3.1

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  180 bits (456), Expect = 5e-50
 Identities = 116/334 (34%), Positives = 177/334 (52%), Gaps = 5/334 (1%)

Query: 1   MATLSDVARRANVTAATVSNVLRNPDKVRPETSERVMRAIRELGYRPNLNARALAEGRSP 60
           MAT+ DVA  A ++  TVS+VL     V  +   +V  AI EL Y P+  AR+L    + 
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60

Query: 61  TLALMLSSIANPFYPEFVLAAERAARRAGYFLMVCNTDDDAETGRAYLTQIAGTLAEGVL 120
           T+ L++ +  NP++ E     E A  R GY +++CN+DD+ +  R+YL  +     +G++
Sbjct: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120

Query: 121 VLNTDIAINELCASAAVGAPIVLSLWEHPEELPALPCVAVDFAHAGALAARHLLELGHRD 180
           V +     + L + A+V  P+V+   +   E      V +D      LA RHLLELGHRD
Sbjct: 121 VASVGQDDDLLQSLASVRTPMVIV--DRELEGVDADLVRIDHEQGAYLATRHLLELGHRD 178

Query: 181 IGMLVGDGCGGLQDARANGFRSVMRDAGLEPDDAAVLQIPDTIDAGFTACIELMEREPHL 240
           +  + G    G+   R +GFR  M +AG     + VL    T   G  A  +++E +   
Sbjct: 179 VAYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLEGK-RP 237

Query: 241 SALFATNDLLAIGALQALATLGRKVPDDVSVIGITDIQLAHQVRPSLTTVAINTQAIAEA 300
           SA+FA ND++  G L+A A     VP ++SVIG  DI+L+  V PSLTTV  + + + E+
Sbjct: 238 SAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGES 297

Query: 301 SIELLIRLIHAPDAAAPPASVVAPLPTLVRRQST 334
           +  LL+  I  P   A    +VA  P +V R+ST
Sbjct: 298 AASLLLTRIATPRQGAAEQRIVA--PRIVLREST 329