Pairwise Alignments
Query, 535 a.a., Tetratricopeptide repeat-containing protein from Paraburkholderia bryophila 376MFSha3.1
Subject, 2017 a.a., Lipopolysaccharide assembly protein B from Azospirillum sp. SherDot2
Score = 164 bits (415), Expect = 3e-44
Identities = 157/474 (33%), Positives = 209/474 (44%), Gaps = 26/474 (5%)
Query: 68 LEASNADAHFRLGYALQMANRHDEAIAPYRRALALNPSLPSLRCNLAGALAVTHGELSEQ 127
++ +A A LG AL R A +R+A+A +P L NL ALA G +E
Sbjct: 1537 VQPDSAAALTNLGNALDALERSAAAAGLHRKAVAADPDLAEAHDNLGVALARL-GRWAEA 1595
Query: 128 IQLLEDTLQDEPDDGNSWTNLSNAYRNNMDVFRALEAGARAVQCAPLSPLAHNNYALALR 187
+ L+ P W NLS A R + A AG RA+ AP A N LR
Sbjct: 1596 ERAHAQALRRAPGLEAGWMNLSVALRRLGRLDAAERAGRRALALAPALADAMANRGRLLR 1655
Query: 188 EAQRWAEAAHASQTACALAPTDASMRSNLAMLQLMSGDYANGWQSHEARWSGSSELRG-N 246
E A AA A A+ P A+ N +L+L +G A GW ++ R+
Sbjct: 1656 ELGDPAAAAPWCARALAVEPGHAAAAFNGGLLELTAGRLAWGWDGYDRRFDTRDMAAAFR 1715
Query: 247 RPALPAPTWRGEPLAGKTLLVWGEQGMGDVLQFSRYIPMLAELVHREGGRLAWNSFPQMG 306
RP AP W G PL+GK LLVW EQG+GD L F++ +P L R+GG + P+
Sbjct: 1716 RPG--APLWGGGPLSGKRLLVWREQGIGDELMFAQRLPELIAWADRDGGHVVVECDPRFV 1773
Query: 307 ALLARSLGGHVDHYSAGGGVESLPPFDFEIPLMSLPLIFGTREATVP-------TTTPYL 359
LLARS + E D IP+ SL G T+P P L
Sbjct: 1774 PLLARSFPRATVRPAPASPGEPSSDIDAHIPIGSLSRRLG---GTLPDFATMGAAVGPAL 1830
Query: 360 YADRAAVQRWQQRLAG-ESRLRVGLTWTGSHGHQRNPFRRVGWERYA--KHLGAIQNVAF 416
AD AAV+ W++RL+G LRVG+ W S Q +P R + R + L + +
Sbjct: 1831 RADPAAVETWRRRLSGLGDGLRVGIAWRSS---QLDPDRMPDYTRIEDWRPLLTLPGLIP 1887
Query: 417 YSLQPGAVADVRAANAAGLPLADY-TAEF---STFDDTAAFVGGLDLVISVCTSAAHLSG 472
+LQ G AA AG A + A+ + D TAA + LDLVI+ TS L+G
Sbjct: 1888 VNLQYGDCGAELAAARAGFGRAPHGFADLDLRNDLDGTAALMSALDLVIAPATSTGELAG 1947
Query: 473 ALGQRTWVLLDVNPHWVWLTGRRDSPWYPGATLYRQEEFGNWDPVLQAVARDLE 526
ALG W L TG R PW+P L+ +L VA +LE
Sbjct: 1948 ALGVPVWRLGRTGDWTALGTGVR--PWFPLMRLFWTGPGERVADLLPKVAAELE 1999
Score = 158 bits (400), Expect = 2e-42
Identities = 145/464 (31%), Positives = 206/464 (44%), Gaps = 31/464 (6%)
Query: 79 LGYALQMANRHDEAIAPYRRALALNPSLPSLRCNLAGALAVTHGELSEQIQLLEDTLQDE 138
LG+ ++A+ +A+ +R A++L P + NL GAL E +LL+ + +
Sbjct: 960 LGHLAELADTPGDAVRVHRIAVSLTPGTADVLSNLGGALHKLL-RFDEAARLLDRATRCD 1018
Query: 139 PDDGNSWTNLSNAYRNNMDVFRALEAGARAVQCAPLSPLAHNNYALALREAQRWAEAAHA 198
P +WTN NA + A A++ AP AH N A L+ R EA A
Sbjct: 1019 PGLAVAWTNRGNALEAMGLIAEAESCHRTAIELAPSLADAHGNLAYLLKRHGRQEEALAA 1078
Query: 199 SQTACALAPTDASMRSNLAMLQLMSGDYANGWQSHEARWSGSSELRGNRPALPAPTWRGE 258
A P A R N ++L L +G GW H+ R++ + + + R L WRGE
Sbjct: 1079 FDAALEADPKHAQARYNRSLLLLETGALRAGWADHDWRFA-TPQFQDQRRRLTMRAWRGE 1137
Query: 259 PLAGKTLLVWGEQGMGDVLQFSRYIPMLAELVHREGGRLAWNSFPQMGALLARSLGGHVD 318
+AG+ LLVW EQG+GD + F+ E R GRL ++ L ARS G
Sbjct: 1138 NIAGRRLLVWREQGVGDEILFA----SCYEEAMRRAGRLVIECDRRLVPLFARSFPG--- 1190
Query: 319 HYSAGGGVESLPP--FDFEIPLMSLPLIFGTREATVPTTTPYLYADRAAVQRWQQRLAGE 376
A ES P D +I SLP + P + +L D A V RW++RLAG
Sbjct: 1191 ---ADVRPESADPRDADLQIAAGSLPRLLRADLKRFPARSSWLVPDPALVARWRERLAGL 1247
Query: 377 S-----RLRVGLTWTGSHGHQRNPFRRVGWERYAKHLGAIQNVAFYSLQPG-AVADVRAA 430
LRVG+ W V +++ L A+ + F +LQ G A++RAA
Sbjct: 1248 GPGLGLGLRVGIGWRSQLMTADRKAAYVMLDQWGP-LFAVPGLTFVNLQYGECEAELRAA 1306
Query: 431 NAA-GLPL---ADYTAEFSTFDDTAAFVGGLDLVISVCTSAAHLSGALGQRTWVLLDVNP 486
G+ + AD + FD AA LDLVIS SA L+GALG W
Sbjct: 1307 EERFGVTIHRWADLNLK-DDFDGAAALTANLDLVISPAMSAGELAGALGLPVWRF--GGR 1363
Query: 487 HWVWL-TGRRDSPWYPGATLYRQEEFGNWDPVLQAVARDLEALA 529
W L TG R PW+P L++ + + + +A L A A
Sbjct: 1364 DWTQLATGAR--PWFPTMRLFQPSQGEGLEAAIARMANALRASA 1405
Score = 132 bits (332), Expect = 1e-34
Identities = 145/516 (28%), Positives = 207/516 (40%), Gaps = 64/516 (12%)
Query: 71 SNADAHFRLGYALQMANRHD---EAIAP---YRRALALNPSLPSLRCNLAGALAVTHGEL 124
S DA + + NR+D ++ P YRRAL L P NLAG + + EL
Sbjct: 304 SPGDAMVVNNHGTSLENRYDLEADSERPARWYRRALRLRPDYGKALVNLAG-IHILRREL 362
Query: 125 SEQIQLLEDTLQDEPDDGNSWTNLSNAYRNNMDVFRALEAGARAVQCAPLSPLAHNNYAL 184
+L +P ++ NL + D+ +A RA+ SP A Y L
Sbjct: 363 HHAERLYRRAAVADPRSVETFVNLGGLLLDRDDLSQAGRMYRRALAIDAGSPSALTGYGL 422
Query: 185 ALREAQRWAEAAHASQTACALAPTDASMRSNLAM-------------------------- 218
L+ R EA A + A + A NL M
Sbjct: 423 VLQRLGRIGEAEAAHRRALEIDGRHAEAAGNLGMMLWQCHQDDTAAEPWMDLALSVNPSL 482
Query: 219 ---------LQLMSGDYANGWQSHEARWSGSSELRGNRPALPAPTWRGEPLAGKTLLVWG 269
L+L GD GW + R+ + NR + AP W+GE AG+ LLVW
Sbjct: 483 NTAHLNRGMLRLSRGDLPGGWDGYRRRFWAKGYV--NR-RIAAPLWQGENSAGRRLLVWR 539
Query: 270 EQGMGDVLQFSRYIPMLAELVHREGGRLAWNSFPQMGALLARSLGG---HVDHYSAGGGV 326
EQG+GD + F+ P L G + ++ L ARS + A G
Sbjct: 540 EQGVGDEIMFASCYPSLI----GRAGHVVIECDRRLVPLFARSFPRATVRAESVDARGDE 595
Query: 327 ESLPP-FDFEIPLMSLPLIFGTREATVPTTTPYLYADRAAVQRWQQRLAG-ESRLRVGLT 384
PP D +P LP + P+L D A V+RW++RLA S LRVG+
Sbjct: 596 TIQPPDVDAHVPAGDLPGRLRASLSGFDGQAPWLVPDPALVKRWRERLAALGSGLRVGIG 655
Query: 385 WTGSHGHQRNPFRRVGWERYAKHLGAIQNVAFYSLQPG-AVADVRAANAA-GLPL---AD 439
W V +++ L A+ + F +LQ G A++RAA G+ + AD
Sbjct: 656 WRSQMMTSERTPAYVMLDQWGP-LFAVPGLTFVNLQYGECEAEIRAAEERFGVTIHRWAD 714
Query: 440 YTAEFSTFDDTAAFVGGLDLVISVCTSAAHLSGALGQRTWVLLDVNPHWVWLTGRRDSPW 499
+ FD AA LDLVIS SA L+GALG W + W L G PW
Sbjct: 715 LNLK-DDFDGAAALTANLDLVISPAMSAGELAGALGLPVWRF--GSRDWTQL-GTEARPW 770
Query: 500 YPGATLYRQEEFGNWDPVLQAVARDLEALAARHRAA 535
+P L++ D L +A++L+ +A+ + A
Sbjct: 771 FPTMRLFQPTTGEALDGALARMAKELQRMASGRQQA 806
Score = 47.4 bits (111), Expect = 5e-09
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 11/165 (6%)
Query: 83 LQMANRHDEAIAPYRRALALNPSLPSLRCNLAGALAVTHGELSEQIQLLEDTLQDEPDDG 142
L A R EA+A YRR L +P+ +L+ +A G +E + L L +P
Sbjct: 13 LHRAGRLAEALALYRRILTDDPAHADA-LHLSAIIAHQTGRTAEALANLGAALAVQPGFA 71
Query: 143 NSWTNLSNAYRNNMDVFRALEAGARAVQCAPLSPLAHNNYALALREAQRWAEAAHASQTA 202
++ +L N + + AL A A++ A+NN A L+ R EAA A A
Sbjct: 72 TAYNSLGNVLADLGMLEEALSAYVVAIRQNDRYVEAYNNRATVLQRLGRRNEAAEAYARA 131
Query: 203 CALAPTDASMRSNLAMLQLMSGDY---ANGW-------QSHEARW 237
+ P + + R N +LQ G AN + SH A W
Sbjct: 132 LTMGPDNLTARFNYGVLQRELGQISPAANAFYAVVQADPSHSAAW 176
Score = 45.8 bits (107), Expect = 2e-08
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 20/196 (10%)
Query: 25 AQWLDAAAQLHSLDNAS--LASHIHALIEQQRHDDAIELAAIIAQLEASNADAHFRLGYA 82
A+ LDAA LH + LA + L + H DA+ L+AIIA
Sbjct: 4 AELLDAALPLHRAGRLAEALALYRRILTDDPAHADALHLSAIIAH--------------- 48
Query: 83 LQMANRHDEAIAPYRRALALNPSLPSLRCNLAGALAVTHGELSEQIQLLEDTLQDEPDDG 142
R EA+A ALA+ P + +L LA G L E + ++
Sbjct: 49 --QTGRTAEALANLGAALAVQPGFATAYNSLGNVLA-DLGMLEEALSAYVVAIRQNDRYV 105
Query: 143 NSWTNLSNAYRNNMDVFRALEAGARAVQCAPLSPLAHNNYALALREAQRWAEAAHASQTA 202
++ N + + A EA ARA+ P + A NY + RE + + AA+A
Sbjct: 106 EAYNNRATVLQRLGRRNEAAEAYARALTMGPDNLTARFNYGVLQRELGQISPAANAFYAV 165
Query: 203 CALAPTDASMRSNLAM 218
P+ ++ +LA+
Sbjct: 166 VQADPSHSAAWRHLAI 181
Score = 42.7 bits (99), Expect = 1e-07
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Query: 55 HDDAIELAAIIAQLEASNADAHFRLGYALQMANRHDEAIAPYRRALALNPSLPSLRCNLA 114
H+ A + A A HF G ALQ R EA+ +R AL P++ CN
Sbjct: 222 HEAACGVLAAAVAAHPGIAQLHFSYGTALQGTRRLREAVVQFRLALDREPAMQG-ACNNL 280
Query: 115 GALAVTHGELSEQIQLLEDTLQDEPDD----GNSWTNLSNAYRNNMDVFRALEAGARAVQ 170
G + GE+ +L + P D N T+L N Y D R RA++
Sbjct: 281 GVALLELGEMGPATLVLSRAVALSPGDAMVVNNHGTSLENRYDLEADSERPARWYRRALR 340
Query: 171 CAP 173
P
Sbjct: 341 LRP 343
Score = 35.0 bits (79), Expect = 3e-05
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 19 GAAESEAQWLDAAAQLHSLDNASLASHIHALIEQQRHDDAIELAAIIAQLEA-------- 70
G A + D AA+L LD A+ A+ R +A+E +IA+ E+
Sbjct: 995 GGALHKLLRFDEAARL--LDRATRCDPGLAVAWTNR-GNALEAMGLIAEAESCHRTAIEL 1051
Query: 71 --SNADAHFRLGYALQMANRHDEAIAPYRRALALNPSLPSLRCN 112
S ADAH L Y L+ R +EA+A + AL +P R N
Sbjct: 1052 APSLADAHGNLAYLLKRHGRQEEALAAFDAALEADPKHAQARYN 1095
Score = 33.9 bits (76), Expect = 6e-05
Identities = 54/204 (26%), Positives = 78/204 (38%), Gaps = 14/204 (6%)
Query: 16 RKNGAAESEAQWLDAAAQLHSLDNASLASHIHALIEQQRHDDAIELAA----IIAQLEAS 71
R+N AAE+ A+ L DN + + L QR I AA + Q + S
Sbjct: 120 RRNEAAEAYARALTMGP-----DNLTARFNYGVL---QRELGQISPAANAFYAVVQADPS 171
Query: 72 NADAHFRLGYALQMANRHDEAIAPYRRALALNPSLPSLRCNLAGALAVTHGELSEQIQLL 131
++ A L L+ H +A A RRAL P L L GAL + G+ +L
Sbjct: 172 HSAAWRHLAICLRNLG-HPDAEACLRRALQDAPGDKDLSLEL-GALLNSRGDHEAACGVL 229
Query: 132 EDTLQDEPDDGNSWTNLSNAYRNNMDVFRALEAGARAVQCAPLSPLAHNNYALALREAQR 191
+ P + A + + A+ A+ P A NN +AL E
Sbjct: 230 AAAVAAHPGIAQLHFSYGTALQGTRRLREAVVQFRLALDREPAMQGACNNLGVALLELGE 289
Query: 192 WAEAAHASQTACALAPTDASMRSN 215
A A AL+P DA + +N
Sbjct: 290 MGPATLVLSRAVALSPGDAMVVNN 313
Score = 30.8 bits (68), Expect = 5e-04
Identities = 52/231 (22%), Positives = 87/231 (37%), Gaps = 26/231 (11%)
Query: 1 MSSAFLNFMRQAAAARKNGAAESEAQWLDAAAQLHSLDNASLASHIHALIEQ-QRHDDAI 59
M+S + A A + + + +A A + D A S + L+++ H A+
Sbjct: 799 MASGRQQAQQAATIAPARPDPDDDRKMAEAVAHYRTGDFALAESVVRQLLDRVPAHSVAL 858
Query: 60 ELAAIIAQLEASNADAHFRLGYALQMANRHDEAIAPYRRALALNPSLPSLRCNLAGALAV 119
L ++A+ S +A L A A P+ N S + C + L
Sbjct: 859 HLGGVLAKRRGSLEEAQDLLVRA--------SAADPH------NASAHAALCEVRQGL-- 902
Query: 120 THGELSEQIQLLEDTLQDEPDDGNSWTNLSNAYRNNMDVFRALEAGARAVQCAP-LSPLA 178
G++ + + +PD W N + R V A A RA+ P L+P
Sbjct: 903 --GQIEAADRASRACVAVQPDSAGHWVNRTALLRRTGQVAAARSAIIRALHLRPDLAPAL 960
Query: 179 HNNYALALREAQRWAEAAHASQTACALAPTDASMRSNL--AMLQLMSGDYA 227
+ L A +A + A +L P A + SNL A+ +L+ D A
Sbjct: 961 GHLAEL----ADTPGDAVRVHRIAVSLTPGTADVLSNLGGALHKLLRFDEA 1007