Pairwise Alignments

Query, 398 a.a., Site-specific recombinase XerD from Paraburkholderia bryophila 376MFSha3.1

Subject, 343 a.a., Tyrosine recombinase XerC from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 40/212 (18%)

Query: 184 LQKIAAPRVIARTPMTLGVDELQQLFA---VTSSPYRLMLRWCVS-----CGLRRFEVCS 235
           +Q + AP+     P  LGVD+  QL +    +  P       C++     CGLR  E+  
Sbjct: 111 VQDVRAPKAGKPLPKALGVDDAVQLASHHEASDDPALEARDACIAELLYGCGLRIGELVG 170

Query: 236 LQVRDLPSTAELGNFADGLARLTILRKGSKELTVHVPSR--------LVEETHWYVLTER 287
           L V          +  DG A   +L KGSK  +V V  +        LV+ T W    E 
Sbjct: 171 LDVAASGQARGWIDAQDGEAH--VLGKGSKRRSVPVGRQALAALAAWLVQRTAW--AGED 226

Query: 288 PAPAANNGHFVFLNRRGGRISRQMLTREFRKSADAIGSKATLHH--LRHTFALVVLSILQ 345
           PA        +F+  RG R++ Q +    ++ +   G    +H   LRH+FA  VL    
Sbjct: 227 PA--------LFIGSRGQRLTPQHIRVRLKRRSLLAGLSTPVHPHMLRHSFASHVL---- 274

Query: 346 RHEEAGQELNPLKALQTLLGHAAIETTETYLR 377
                 Q    L+A+Q LLGHA+I TT+ Y R
Sbjct: 275 ------QSSGDLRAVQELLGHASISTTQVYTR 300