Pairwise Alignments

Query, 398 a.a., Site-specific recombinase XerD from Paraburkholderia bryophila 376MFSha3.1

Subject, 300 a.a., Tyrosine recombinase XerC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 32/242 (13%)

Query: 142 NFHAWGQRCTLMPSPLGAYLCTPRSVVESRVSSHRRVFHASRLQKIAAPRVIARTPMTLG 201
           +F    +R  L P+ L   L   RS  +  VS       A+  + ++AP+     P  + 
Sbjct: 60  SFAVRSRRKGLGPASLALRLSALRSFFDWLVSQGE--LKANPAKGVSAPKAPRHLPKNID 117

Query: 202 VDELQQLFAVT-SSPY----RLMLRWCVSCGLRRFEVCSLQVRDLPSTAELGNFADGLAR 256
           VD++ +L  +  + P     R ML      GLR  E+  L ++ L               
Sbjct: 118 VDDVNRLLDIDLNDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLDT---------GE 168

Query: 257 LTILRKGSKELTVHVPSRLVEET-HWYVLTERPAPAANNGHFVFLNRRGGRISRQMLTRE 315
           + ++ KGSKE  + +    V    HW  L       A++   +FL++ G RIS + + + 
Sbjct: 169 VWVMGKGSKERRLPIGRNAVTWIEHWLDLR---GLFASDEEALFLSKLGKRISARNVQKR 225

Query: 316 FRKSA--DAIGSKATLHHLRHTFALVVLSILQRHEEAGQELNPLKALQTLLGHAAIETTE 373
           F +      + S    H LRH+FA  +L      E +G     L+ +Q LLGHA + TT+
Sbjct: 226 FAEWGIKQGLNSHVHPHKLRHSFATHML------ESSGD----LRGVQELLGHANLSTTQ 275

Query: 374 TY 375
            Y
Sbjct: 276 IY 277