Pairwise Alignments

Query, 1062 a.a., Multidrug efflux pump subunit AcrB from Paraburkholderia bryophila 376MFSha3.1

Subject, 1060 a.a., RND multidrug efflux transporter; Acriflavin resistance protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  383 bits (983), Expect = e-110
 Identities = 299/1065 (28%), Positives = 511/1065 (47%), Gaps = 63/1065 (5%)

Query: 1    MWIVNVALKRPYTFIVMAILIVLATPFVLFTTPVDVLPEINIPVVSIIWTYNGLSAEDMA 60
            MW   V+L+ P    ++ I  V+   F      VD  P I+ PVV +   Y G S E + 
Sbjct: 1    MWFTQVSLRNPVFATMVMIAFVVLGLFSFQRLQVDQFPNIDFPVVVVQVAYPGASPEIVE 60

Query: 61   HRIASVNERSLTTTVNDIEHIESQSLAGITILKVFLQPTANIQTAIAQTVAVEQAQLKQM 120
              +    E ++   +  +  + S+S  G +++ +  Q T + + A A+ V  + A L+ +
Sbjct: 61   SEVTKKVEEAVNA-IAGVNTLTSRSYEGQSLVIIEFQLTVDGRKA-AEDVREKIAILRPV 118

Query: 121  -PPGATPPLVISYSASS-----IPVIQLGLSSTKLSEQQLNDTALNFLRPQLVTIPGAAV 174
                   P V+ +  +S     + VI         S  +L   A   L+ +L  + G   
Sbjct: 119  FRDEVEEPRVLRFDPASRSIWSVAVIPQAADGKTPSAVELTTWAEQVLKKRLENVRGVGS 178

Query: 175  PYPYGGKSRLISVDLNTRALLSKGLTPLDVVSAFNAQNLILPTGTAKIGPKEYTINMNGS 234
                G   R +++DL+  A+ + G+TP  V +A   +N  LP GT K G  E  + +   
Sbjct: 179  VTLVGATRRAVNIDLDPSAMEALGVTPEQVNAAVRNENQDLPVGTLKAGEAERVVQLLSR 238

Query: 235  PATLEGLNDIPVRTVNGATTYLREVAHVRDGFSPQTNIVRENGHRGVLMSVLKNGSASTL 294
                +    I V    G    L +VA V DG     ++   NG R +L+ V K    +T+
Sbjct: 239  LQNPQDFEHIIVARRGGQAVRLGQVARVSDGTQEVESLALYNGQRTLLLQVQKAQDENTI 298

Query: 295  SIVNTLHGLLPAARAALPPDLKITALFDQSVFVKAAVQGVVREAVVAAALTAAMILLFLG 354
            ++ + L   + A  A LPP +++  + D S  ++ +V+ V R  +  A LT  ++ LFL 
Sbjct: 299  AVTDGLKAAVAALGAELPPGVRLEQIADGSRPIRVSVENVRRTLIEGAVLTVLIVFLFLN 358

Query: 355  NWRSTCIIAISIPLSILSSLIALHALGQTINIMTLGGLALAVGILVDDATVTIENIERHL 414
            +WRST I  +++P++++ +   ++  G TIN++TL  L L+VG+L+DDA V  ENI RH+
Sbjct: 359  SWRSTVITGLTLPIALIGTFFFMNLFGFTINMITLMALTLSVGLLIDDAIVVRENIVRHV 418

Query: 415  HMGTNLHDAILEGAGEIAIPALVSTLCICIVFVPMFFLTGVARYLFVPLAEAVVFAMLAS 474
             MG    DA ++G  EI +  L +TL I  VF+P+ F+ G+    F      +V A+L S
Sbjct: 419  QMGKRPFDAAMDGTQEIGLAVLATTLSIVAVFLPIGFMGGIIGKFFHEFGITMVAAVLIS 478

Query: 475  YVLSRTLVPTLAML-----LMGHAHKPKADMKPSLFARLYRRFDNGFER----MRAAYIV 525
              +S TL P L+ +     +  H H P    K +L+ R   R    F+R    +   Y  
Sbjct: 479  MFVSFTLDPMLSSVWHDPEIEKHGH-PGTGPK-TLYDRTIGRVTGWFDRFQDDLSHTYQG 536

Query: 526  ILSSLLVRRARFGSIFLGFCVVSMGLAFVLGEDFFPSVDAGNIRLHMRAPTGTRIEETAR 585
             L   L  +     + L   V S+ +  +LG +F P+ D     L    P G+ +E T  
Sbjct: 537  TLRWSLKHKLATLGLALATFVGSLFILPLLGTEFVPTADFSETSLSFHTPVGSSLEATEA 596

Query: 586  LADEVEKVIREVVPEKELGTILDNLGLPYSGINLSYSNAGTIGTLDGEIQIALKEGHEPT 645
               EVE ++R   PE           + Y+   L+  NA   G +   I + L + HE T
Sbjct: 597  KTREVEGILRS-FPE-----------VKYTLSTLNTGNAQ--GAMYASIYVRLTDRHERT 642

Query: 646  QLYVDKLRAMLPQRFPGVEFFFQPADIVTQILNFGLPAA------VDIQIAGADQQGNFD 699
             L   ++ A L +R   V     P   VT +   GL  A      V+  + G D      
Sbjct: 643  -LSAVEMSARLRERLRSV-----PGITVTHV---GLLDAVGGNKQVEFSLQGDDLAELER 693

Query: 700  VARKLLKQVRMIPGTVDTHIQQKLDEPAINLQMDRTRLQQLNLTASNVAQNVLISLSGSS 759
            + + +++++R I G VD     K ++P ++++M R     + ++ S V  ++   ++G  
Sbjct: 694  LTQTVMERIRPIVGLVDLDASVKPNKPTVDVKMKRDLASDVGVSVSTVGASLRTLVAG-- 751

Query: 760  QTSPGFWYNDRNGVEYNVAVQTPQYSISSIDDLLRTP----VSASATGPTQLLGNLVRVQ 815
             T+ G W    +G  Y+V V+          DL + P     +A  T     LG +  V 
Sbjct: 752  -TTVGNW-RAADGQSYDVNVRLAPGGRERASDLEQLPFVVGTAADGTARVVRLGQVADVV 809

Query: 816  PQNQFAVVTHYNIRPVIDLYVSVDKRDLGSVADQVDKLVEQARASLPRGSQITVRGQVQT 875
                   +   N+   + +  +V  R  G V+ ++ ++++    + P G +    G  + 
Sbjct: 810  DATGPNQINRRNLNREVSINANVYGRSPGEVSAEIRQVLD--AIAFPPGYRYEFGGSTKN 867

Query: 876  MRSSYFGLGLGVAMAIVLVYLLIVVNFQSWVDPLIIVSALPAALAGIVWMLFLTGTHLSV 935
            M+ S+      +A+AI+ +Y+++   FQS++ PL ++++LP  L G+   L + G+ +S+
Sbjct: 868  MQESFGYAVSALALAIIFIYMILASQFQSFLQPLALMTSLPLTLIGVALTLLMFGSSMSM 927

Query: 936  PALTGAIMTMGVATANSILMVAFA--RQRLSAGAPPL---TAALEAGASRIRPVLMTAFA 990
             ++ G ++ MG+ T N+IL+V FA   +   AG PP+   +A L A   R+RP+LMT  A
Sbjct: 928  FSVIGIVLLMGLVTKNAILLVDFAIRAREGRAGEPPMDRESALLLAARVRLRPILMTTLA 987

Query: 991  MIIGMIPMALGLGEGAEQNAPLGRAVIGGLLFATVSTLFFVPLVF 1035
            M+ GM+P+A  L EG+EQ AP+G+AVIGG++ +++ TL  VP+V+
Sbjct: 988  MVFGMVPLAFALTEGSEQRAPMGQAVIGGVITSSLLTLVVVPVVY 1032