Pairwise Alignments

Query, 1062 a.a., Multidrug efflux pump subunit AcrB from Paraburkholderia bryophila 376MFSha3.1

Subject, 1028 a.a., RND multidrug efflux transporter; Acriflavin resistance protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  358 bits (918), Expect = e-102
 Identities = 286/1072 (26%), Positives = 485/1072 (45%), Gaps = 55/1072 (5%)

Query: 1    MWIVNVALKRPYTFIVMAILIVLATPFVLFTTPVDVLPEINIPVVSIIWTYNGLSAEDMA 60
            M +  ++++RP    V+++LI+L          V   P+I+ P V++   + G S+E + 
Sbjct: 1    MQLPEISIRRPVFASVLSLLILLVGIVSFNGLTVREYPKIDEPTVTVSTRFGGASSEVIE 60

Query: 61   HRIASVNERSLTTT--VNDIEHIESQSLAGITI-LKVFLQPTANIQTAIAQTVAVEQAQL 117
             ++    E SL     ++ I  I  Q  + IT+  K+   P +       +   V Q   
Sbjct: 61   SQVTKPLEDSLAGIEGLDVITSISRQEQSQITVRFKLERDPDSAAADVRDKVSRVRQ--- 117

Query: 118  KQMPPGATPPLVISYSASSIPVIQLGLSSTKLSEQQLNDTALNFLRPQLVTIPGAAVPYP 177
             ++P     P++    A + PVI L L+S   S  QL+D A    +P L T PGAA    
Sbjct: 118  -RLPQDVDEPVIAKVEADASPVIWLALTSDTHSALQLSDFANRLAKPVLQTAPGAAEVRV 176

Query: 178  YGGKSRLISVDLNTRALLSKGLTPLDVVSAFNAQNLILPTGTAKIGPKEYTINMNGSPAT 237
            YG +   + + ++   L +  LT  DV  A    NL +P G  +   +E+ +       T
Sbjct: 177  YGERRYSMRIWMDPDRLAAYALTVQDVEDALRRSNLEVPAGRIESTLREFNVTAATDLQT 236

Query: 238  LEGLNDIPVRTVNGATTYLREVAHVRDGFSPQTNIVRENGHRGVLMSVLKNGSASTLSIV 297
                  + +RT+NG T  + +VA V      +   VR NG   V + V++  +A+ L + 
Sbjct: 237  PAQFAAVAIRTINGQTIRIGDVARVVQAPQDERTSVRLNGRDAVSLGVIRQATANPLELS 296

Query: 298  NTLHGLLPAARAALPPDLKITALFDQSVFVKAAVQGVVREAVVAAALTAAMILLFLGNWR 357
              +  +L   +  LP  + +    D SVF+  +++ V      A  L A +I +FL   R
Sbjct: 297  AAVRQMLEKVKQDLPAGVNVDVANDNSVFIDRSIKAVYTTIAEAVVLVALVIFVFLRTLR 356

Query: 358  STCIIAISIPLSILSSLIALHALGQTINIMTLGGLALAVGILVDDATVTIENIERHLHMG 417
            ++ I  ++IP+S++ +   +   G +IN +TL  L LA+G++VDDA V +ENI RH+  G
Sbjct: 357  ASIIPLMTIPVSLIGAFALMAMFGFSINTLTLLALVLAIGLVVDDAIVMLENIYRHIEEG 416

Query: 418  TNLHDAILEGAGEIAIPALVSTLCICIVFVPMFFLTGVARYLFVPLAEAVVFAMLASYVL 477
                DA ++GA EI    +  TL +  V+ P+ F  G    LF   A A+  A++ S  +
Sbjct: 417  MKPFDAAIQGAREIGFAIVAMTLTLAAVYAPLAFTPGRTGRLFAEFALALAGAVVVSGFV 476

Query: 478  SRTLVPTLAMLLMGHAHKPKADMKPSLFARLYRRFDNGFERMRAA----YIVILSSLLVR 533
            + TL P L   L+ H   P              RFD G ER+  A    +   L + L  
Sbjct: 477  ALTLSPMLCSKLLRHNPNP-------------GRFDRGMERVLNAVTRGFSRALGASLRV 523

Query: 534  RARFGSIFLGFCVVSMGLAFVLGEDFFPSVDAGNIRLHMRAPTGTRIEETARLADEVEKV 593
            R    ++  G  + S  +   + ++  P  D G I  ++  P G  +  T + A+ +E +
Sbjct: 524  RWLVVAVMAGSALASAWMLQTMRQELAPIEDRGVILANINGPDGATLAYTRKYAEAIENI 583

Query: 594  IREVVPEKELGTILDNLGLPYSGINLSYSNAGTIGTLDGEIQIALKEGHEPTQLYVDKLR 653
             ++     E   I  N+G P     + +  A           +  +E    TQ    ++ 
Sbjct: 584  AQDY---PEFDRIFVNVGNPSVAQGVVFMRA-----------LPWEERERSTQRIAREIT 629

Query: 654  AMLPQRFPGVEFFFQPADIVTQILNFGL-PAAVDIQIAGADQQGNF-DVARKLLKQVRMI 711
              L    PG+  F     I    L  G     ++  I  +D   N     R+   ++   
Sbjct: 630  PRLAS-LPGISAF----PITPPSLGQGFRERPINYVIVTSDSYENLAQTVRRFQDELSKN 684

Query: 712  PGTVDTHIQQKLDEPAINLQMDRTRLQQLNLTASNVAQNVLISLSGSSQTSPGFWYNDRN 771
            PG V      +L++P I + +DR R   + +    +A+ V   L G   T        R+
Sbjct: 685  PGLVQIDTDLRLNKPEIRMDVDRERAADMGVNVDAIARTVETMLGGRIVTR-----YKRD 739

Query: 772  GVEYNVAVQTPQYSISSIDDLLRTPVSASATGPTQLLGNLVRVQPQNQFAVVTHYNIRPV 831
            G +Y+V VQT   + S+ +D+ R  V          L +LV++        + H+  R  
Sbjct: 740  GEQYDVVVQTVSGNRSTPEDIDRLFVRGRNDAMIP-LASLVKISEVVVPRELNHFGQRRS 798

Query: 832  IDLYVSV-DKRDLGSVADQVDKLVEQARASLPRGSQITVRGQVQTMRSSYFGLGLGVAMA 890
              L  ++     LG     +DK    AR  LP G    + GQ +  R++   L +  A++
Sbjct: 799  ASLTANLAPDYALGEALQFMDK---TAREVLPAGYTTDLNGQSREFRNASGSLAIVFALS 855

Query: 891  IVLVYLLIVVNFQSWVDPLIIVSALPAALAGIVWMLFLTGTHLSVPALTGAIMTMGVATA 950
            ++ +YL++   F+S+VDP II+ ++P ++ G +  L LTG  ++V +  G I  +G+ T 
Sbjct: 856  LLFIYLVLAAQFESFVDPFIIMLSVPLSMMGALLALKLTGGTINVFSQIGLITLVGLITK 915

Query: 951  NSILMVAFARQRLSAGAPPLTAALEAGASRIRPVLMTAFAMIIGMIPMALGLGEGAEQNA 1010
            + IL+V FA Q    G     A  ++ A R+RP+LMT  AM++G IP+AL  G GAE   
Sbjct: 916  HGILIVEFANQLRDQGLEKFEAVRQSAALRLRPILMTTGAMVLGAIPLALASGAGAESRQ 975

Query: 1011 PLGRAVIGGLLFATVSTLFFVPLVFAGIHTRLARRHRNDHEESGNGDAGQPA 1062
             +G  ++GG+   T+ T+F VP ++  +    +       +  G+ +A  PA
Sbjct: 976  QIGWVIVGGMSVGTLLTIFVVPTMYTLLSRDKSHSKAKAAQHGGHPEAAIPA 1027