Pairwise Alignments

Query, 1062 a.a., Multidrug efflux pump subunit AcrB from Paraburkholderia bryophila 376MFSha3.1

Subject, 1051 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  374 bits (960), Expect = e-107
 Identities = 275/1064 (25%), Positives = 499/1064 (46%), Gaps = 44/1064 (4%)

Query: 1    MWIVNVALKRPYTFIVMAILIVLATPFVLFTTPVDVLPEINIPVVSIIWTYNGLSAEDMA 60
            M I  +++KR    +V+  ++ L   F       ++LP+ +  VV++   Y G +  ++ 
Sbjct: 1    MQITKISIKRSTIVVVLFTILTLLGIFSYTQMSYELLPKFSPNVVTVSTVYPGAAPSEVE 60

Query: 61   HRIASVNERSLTTTVNDIEHIESQSLAGITILKVFLQPTANIQTAIAQTVAVEQAQLKQM 120
            + +    E +L + +  I+ ++S SL   +I+ + L    ++   +        A L  +
Sbjct: 61   NSVTRKLEDALAS-LEGIDVMKSTSLESFSIITIELDDDVDVDLILQDAQRDIDAVLGDL 119

Query: 121  PPGATPPLVISYSASSIPVIQLGLSSTKLSEQQLNDTALNFLRPQLVTIPGAAVPYPYGG 180
            P    PP +  +S   +P++Q+G  S  L+     D     ++P +  I G A     GG
Sbjct: 120  PEDVDPPSLGKFSLDDMPIMQMGAYSN-LTATDFYDLMDQRIQPMISQIDGVAQVNLLGG 178

Query: 181  KSRLISVDLNTRALLSKGLTPLDVVSAFNAQNLILPTGTAKIGPKEYTINMNGSPATLEG 240
              R I V+L+   L + G++PL V  A    NL  PTG  K   ++  I + G    ++ 
Sbjct: 179  AEREIKVNLDQNKLNTYGISPLQVNQAIAQANLDFPTGKLKSDKEQILIRLAGKFTQVDE 238

Query: 241  LNDIPVRTVNGATTYLREVAHVRDGFSPQTNIVRENGHRGVLMSVLKNGSASTLSIVNTL 300
            + ++ V   +G+   +++VA V D    +  + R NG+  + +S+ K   A+ + +   +
Sbjct: 239  IGELIVSYADGSPIKIKDVAEVVDSNKDEEILSRLNGNSAIGISIQKQSDANAVDVAERV 298

Query: 301  HGLLPAARAALP-PDLKITALFDQSVFVKAAVQGVVREAVVAAALTAAMILLFLGNWRST 359
            +  L          DL+     D S F   A   V+ + ++A  L A ++LLFL ++R+ 
Sbjct: 299  NKALAQLETTYAGDDLRFEISQDSSEFTLEAANAVIHDLIIAVVLVAVIMLLFLHSFRNA 358

Query: 360  CIIAISIPLSILSSLIALHALGQTINIMTLGGLALAVGILVDDATVTIENIERHLHMGTN 419
             I+ I++P+SI+++   ++  G T+N+M+L  L+L VGILVDDA V IENI RH+  G +
Sbjct: 359  VIVMIAVPMSIIATFTVMYLAGFTLNLMSLLALSLVVGILVDDAIVVIENIYRHMEKGKS 418

Query: 420  LHDAILEGAGEIAIPALVSTLCICIVFVPMFFLTGVARYLFVPLAEAVVFAMLASYVLSR 479
               A  +G  EI       TL I +VFVP+    G+   +    +  V  A + S +++ 
Sbjct: 419  AIQASYDGIREIGGTVTSITLVIVVVFVPLSMTGGLISGILTQFSITVAVATMMSLLVAF 478

Query: 480  TLVPTLAMLLMGHAH-KPKADMKPSLFARLYRRFDNGFERMRAAYIVILSSLL------- 531
            TL+P L        H  PK     S+F ++     NGFE    A++  L+ +L       
Sbjct: 479  TLIPLLTSRFSKLEHLDPK-----SIFGKIV----NGFEGFLDAFVAWLTGILKWSFNHK 529

Query: 532  --VRRARFGSIFLGFCVVSMGLAFVLGEDFFPSVDAGNIRLHMRAPTGTRIEETARLADE 589
                 A F      F +V  G    +G +F    D G   + +  P    +EET     E
Sbjct: 530  IITLVATFVLFVSSFMLVGYGF---IGSEFVSQGDKGEFIMRLELPKSATLEETNFTTRE 586

Query: 590  VEKVI-REVVPEKELGTILDNLGLPYSGINLSYSNAGTIGTLDGEIQIALKEGHEPTQLY 648
             E  + +  +      T+    G      +  Y++  T+  +DG      K+ +     +
Sbjct: 587  AENFLTKNPMVTSVFTTVGQTTGSMSGSQSTPYASEITVKMVDG------KKRNLTAPEF 640

Query: 649  VDKLRAMLPQRFPGVEFFFQPADIVTQILNFGLPAAVDIQIAGADQQGNFDVARKLLKQV 708
              ++   L +   G EF   P  I T   N    A + I ++G D       ++++L +V
Sbjct: 641  AREMEIALEENIVGAEFTAVPIGI-TGTAN---DAPIQIVLSGPDLDTLKSFSQRVLAEV 696

Query: 709  RMIPGTVDTHIQQKLDEPAINLQMDRTRLQQLNLTASNVAQNVLISLSGSSQTSPGFWYN 768
              +PGT       +   P I +++DR ++  L L  + V   + ++ +G++ T     Y 
Sbjct: 697  EKVPGTRKAQTSLEDGNPEIRVEVDRAKMSDLGLDMAMVGGTMQVAFNGNTDTK----YR 752

Query: 769  DRNGVEYNVAVQTPQYSISSIDDLLRTPVSASATGPTQLLGNLVRVQPQNQFAVVTHYNI 828
            D +  EY++ ++  ++   S+ D+       +  G T LL    +  P    + +   + 
Sbjct: 753  DGD-YEYDINIRMDEFDRKSVADI-ENLAFVNTKGQTVLLKQFAKAIPSEGPSELNRQDR 810

Query: 829  RPVIDLYVSVDKRDLGSVADQVDKLVEQARASLPRGSQITVRGQVQTMRSSYFGLGLGVA 888
               + +   V  R  G+V  ++ + +  A+  LP+   +   G ++     +  LG+ + 
Sbjct: 811  ITSVTVQSQVSGRPSGTVGTEIQERI--AKLDLPKEVTVAYEGDMKMQEEGFGSLGVALL 868

Query: 889  MAIVLVYLLIVVNFQSWVDPLIIVSALPAALAGIVWMLFLTGTHLSVPALTGAIMTMGVA 948
             +I+L+YL++V  + ++V PL+++ +LP A+ G +  L ++G+ LS+ ++ G IM MG+ 
Sbjct: 869  ASILLIYLIMVALYDNYVFPLVVMFSLPLAVIGALLALAMSGSALSIFSILGLIMLMGLV 928

Query: 949  TANSILMVAFARQRLSAGAPPLTAALEAGASRIRPVLMTAFAMIIGMIPMALGLGEGAEQ 1008
              N+IL+V F  Q  +AG     A ++A   R RP+LMT  AM+ GM+P+AL  G GAE 
Sbjct: 929  AKNAILLVDFTNQLKAAGLEVKAALVKAVEIRFRPILMTTLAMVFGMLPIALASGAGAEW 988

Query: 1009 NAPLGRAVIGGLLFATVSTLFFVPLVFAGIHTRLARRHRNDHEE 1052
               L  A+IGGL+ +   T+  VP+++      LAR  ++  EE
Sbjct: 989  KNGLAWALIGGLISSMFLTMVVVPVIYYIFDRILARFGKDKKEE 1032