Pairwise Alignments

Query, 1062 a.a., Multidrug efflux pump subunit AcrB from Paraburkholderia bryophila 376MFSha3.1

Subject, 1029 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  578 bits (1490), Expect = e-169
 Identities = 344/1022 (33%), Positives = 554/1022 (54%), Gaps = 20/1022 (1%)

Query: 15   IVMAILIVLATPFVLFTTPVDVLPEINIPVVSIIWTYNGLSAEDMAHRIASVNERSLTTT 74
            +V  + IV      +   PVD+ P++  P + +  TY GL+   +   + S  E      
Sbjct: 1    MVALLAIVFFAVLSIRNMPVDIFPKLGTPTIYVAQTYGGLAPNQIEGFMTSYYEYHFLY- 59

Query: 75   VNDIEHIESQSLAGITILKVFLQPTANIQTAIAQTVAVEQAQLKQMPPGATPPLVISYSA 134
            +N I+ +ES+++ G++++K+      ++  A+A+ VA        MPPG  PP +  +  
Sbjct: 60   INGIKEVESKTIQGVSLMKLTFHEGTDMSQALAEVVAQVNRSRAFMPPGTVPPFITRFDG 119

Query: 135  SSIPVIQLGLSSTKLSEQQLNDTALNFLRPQLVTIPGAAVPYPYGGKSRLISVDLNTRAL 194
               PV QL  SS   S  ++ D AL  +RP+  +IPG + P P+GG  R + +  +   L
Sbjct: 120  GGAPVGQLVFSSESRSLGEIQDLALFKVRPKFASIPGVSAPPPFGGNQRTVLIKADPSKL 179

Query: 195  LSKGLTPLDVVSAFNAQNLILPTGTAKIGPKEYTINMNGSPATLEGLNDIPVRTVNGATT 254
             S  ++P ++V A    N I P+G  +   K   +N N   + ++ L +IP++  +G   
Sbjct: 180  RSYNISPDELVMAIAKGNTISPSGNIRTADKLLIVNQNTVVSDIQELANIPLKKGSGPAV 239

Query: 255  YLREVAHVRDGFSPQTNIVRENGHRGVLMSVLKNGSASTLSIVNTLHGLLPAARAALPPD 314
            Y+R+VA V++G    +     NG R V + V K  SAST  +V  +   LP  +AA+P D
Sbjct: 240  YVRDVAEVQNGSDVASGYALINGSRSVYIPVTKRASASTWDVVRRIKASLPEMQAAVPDD 299

Query: 315  LKITALFDQSVFVKAAVQGVVREAVVAAALTAAMILLFLGNWRSTCIIAISIPLSILSSL 374
            +K++  FDQS +V  +++ +  E ++ A LT  M+LLFLG+ RS  I+ ++IPL+ILS++
Sbjct: 300  IKVSYEFDQSGYVINSLKTLSFEGILGAVLTGLMVLLFLGDRRSALIVILTIPLAILSAI 359

Query: 375  IALHALGQTINIMTLGGLALAVGILVDDATVTIENIERHLHMGTNLHDAILEGAGEIAIP 434
            + L+  GQTINIMTLGGLALA+GILVD++TVTIENI RH  MG     AIL+   EIA+P
Sbjct: 360  VCLYLTGQTINIMTLGGLALAIGILVDESTVTIENIHRHQEMGKTKTRAILDACKEIALP 419

Query: 435  ALVSTLCICIVFVPMFFLTGVARYLFVPLAEAVVFAMLASYVLSRTLVPTLAMLLMGHAH 494
             L+  + I  VFVP FF++G  R +F+PL  AV FAM+AS++LS+T+VP L+   +    
Sbjct: 420  KLLILISILAVFVPSFFMSGTPRAMFLPLTLAVGFAMIASFLLSQTMVPILSNWFLKDHV 479

Query: 495  KPKADMKPSLFARLYRRFDNGFERMRAAYIVILSSLLVRRARFGSIFLGFCVVSMGLAFV 554
              K D K   F      +  G        I I  +++V  A   S++             
Sbjct: 480  PQKEDGKFHRFRNRVTGYTKGITNKGGWAIGIYLAVIV--AMLASLWQ-----------F 526

Query: 555  LGEDFFPSVDAGNIRLHMRAPTGTRIEETARLADEVEKVIREVVPEKELGTILDNLGLPY 614
             G + FP V++G +++ +R P GTRIE T     +  +V+ EVV ++ +      +G+  
Sbjct: 527  TGTEIFPKVNSGQLQVRLRMPDGTRIENTEEKTKQFLEVVNEVVGKENVEITSAFVGIQP 586

Query: 615  SGINLSYSNAGTIGTLDGEIQIALKEGHEPTQLYVDKLRAMLPQRFPGVEFFFQPADIVT 674
                ++     T G  +  ++I LKE  +   +  + LR  + +  P +   F+PAD+V 
Sbjct: 587  PSYPVNTIFLWTGGPHEAVVKIKLKETGQDLDVLKETLRKRIAEAIPDMRLSFEPADLVD 646

Query: 675  QILNFGLPAAVDIQIAGADQQGNFDVARKLLKQVRMIPGTVDTHIQQKLDEPAINLQMDR 734
            Q+++ G   +V+I + G +   +   A  +  ++  +    D      L+ P+I+L+ DR
Sbjct: 647  QVMSQGANTSVEIAVQGKNLSESRKFAEAIKDRIEGLSFMRDVQFGIPLNYPSIDLEYDR 706

Query: 735  TRLQQLNLTASNVAQNVLISLSGSSQTSPGFWYNDRNGVEYNVAVQTPQYSISSIDDLLR 794
             R  QL LT  +++++V  S S S  T P +W +  +G  Y V V+ PQY I   DD+ R
Sbjct: 707  VRAGQLGLTIEDISRSVTASTSSSRFTQPNYWLDAGSGHAYQVQVEFPQYLIDQPDDIER 766

Query: 795  TPVSASATGPTQLLGNLVRVQPQNQFAVVTHYNIRPVIDLYVSVDKRDLGSVADQVDKLV 854
             P+  S  G T   G++ + +P          N +  I +  ++  +DLG     +   +
Sbjct: 767  VPLK-SENGKTVYAGDVGKWEPATMIGEYDRLNQQRFITITGNLHNKDLGGAIKTLRNEL 825

Query: 855  EQARASLPRGSQITVRGQVQTMRSSYFGLGLGVAMAIVLVYLLIVVNFQSWVDPLIIVSA 914
             +A    P G  +  RG  +T+  ++  L  G+ +A+ +++LL+  NFQS+     ++S 
Sbjct: 826  -KAMGDPPAGMSVKFRGLAETLTQTFNELSTGLLLAVAVIFLLLAANFQSFRLSFAVLST 884

Query: 915  LPAALAGIVWMLFLTGTHLSVPALTGAIMTMGVATANSILMVAFARQ-RLSAGAPPLTAA 973
            +PA +AG   +++++G+ L++ +  G+IM +GVA AN+IL V  A Q R      P    
Sbjct: 885  VPAVIAGSFLLIWISGSTLNIQSFMGSIMAIGVAVANAILFVTIAEQYRKDQRQNP---H 941

Query: 974  LEAGASRIRPVLMTAFAMIIGMIPMALGLGEGAEQNAPLGRAVIGGLLFATVSTLFFVPL 1033
            LE    R+RP+LMT  AMI GM PMALGLGEG EQ APLG AVIGGLLF+  +T+F +P 
Sbjct: 942  LEGIKDRLRPILMTTIAMIAGMTPMALGLGEGGEQTAPLGIAVIGGLLFSVFATVFMLPA 1001

Query: 1034 VF 1035
            ++
Sbjct: 1002 IY 1003



 Score = 54.3 bits (129), Expect = 5e-11
 Identities = 72/324 (22%), Positives = 127/324 (39%), Gaps = 39/324 (12%)

Query: 195  LSKGLTPLDVVSAFNAQNLILPTGTAKIGPKEYTINMNGSPATLEGLNDI---PVRTVNG 251
            +S+ +T     S F   N  L  G+       Y + +      ++  +DI   P+++ NG
Sbjct: 719  ISRSVTASTSSSRFTQPNYWLDAGSGHA----YQVQVEFPQYLIDQPDDIERVPLKSENG 774

Query: 252  ATTYLREVAHVRDGFSPQTNIVRENGHRGVLMSVLKNGSASTLSIVNTLHGL-LPAARAA 310
             T Y  +V      + P T I   +          +      ++I   LH   L  A   
Sbjct: 775  KTVYAGDVGK----WEPATMIGEYD----------RLNQQRFITITGNLHNKDLGGAIKT 820

Query: 311  LPPDLKITALFDQSVFVKAAVQGVVR-------EAVVAAALTAAMILLFLG----NWRST 359
            L  +LK  A+ D    +    +G+         E      L  A+I L L     ++R +
Sbjct: 821  LRNELK--AMGDPPAGMSVKFRGLAETLTQTFNELSTGLLLAVAVIFLLLAANFQSFRLS 878

Query: 360  CIIAISIPLSILSSLIALHALGQTINIMTLGGLALAVGILVDDATVTIENIERHLH-MGT 418
              +  ++P  I  S + +   G T+NI +  G  +A+G+ V +A + +   E++      
Sbjct: 879  FAVLSTVPAVIAGSFLLIWISGSTLNIQSFMGSIMAIGVAVANAILFVTIAEQYRKDQRQ 938

Query: 419  NLHDAILEGAGEIAIPALVSTLCICIVFVPMFFLTGVARYLFVPLAEAVVFAMLASYVLS 478
            N H   LEG  +   P L++T+ +     PM    G       PL  AV+  +L S   +
Sbjct: 939  NPH---LEGIKDRLRPILMTTIAMIAGMTPMALGLGEGGEQTAPLGIAVIGGLLFSVFAT 995

Query: 479  RTLVPTLAMLLMGHAHKPKADMKP 502
              ++P +   L+G  H     + P
Sbjct: 996  VFMLPAIYWQLIGRKHYKSISLDP 1019