Pairwise Alignments

Query, 342 a.a., DNA end-binding protein Ku from Paraburkholderia bryophila 376MFSha3.1

Subject, 298 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  139 bits (351), Expect = 7e-38
 Identities = 95/306 (31%), Positives = 156/306 (50%), Gaps = 17/306 (5%)

Query: 6   WKGAISFGLVHVPVQLYPA-TKSEKVGFNLLDKRTIDPVGYKQINKRTGKDVTRDNIVRG 64
           WKG I +G V  PV LY A + SE++ FN L+++T + V  + ++  TG  V RD  V+G
Sbjct: 8   WKGFIKYGEVACPVALYTAASSSERIAFNTLNRKTGNRVKREFVDSETGDPVERDEQVKG 67

Query: 65  FEYEKDKYVVLTDDEIRAANPESTQTVDILAFVDAPDISFLYLDTPYFLTPDRKGEKVYA 124
           +E E  +Y++L  +E+ AA P+S +T+ I AF+   +I  +Y D PY+L PD+ G   + 
Sbjct: 68  YEVENGQYIILEPEEVAAAVPDSDKTLKIDAFIPCHEIDDVYFDKPYYLAPDKMGTDAFL 127

Query: 125 LLREAMKSSGKVGVASVVLHNKQHLAALIPVGPVLALNTLRWAEEVRDFDEFKLPAEGTK 184
           LLR+ MK +    +A  VL  +     + P G  L   TL +  EVR   E     E   
Sbjct: 128 LLRDGMKKAKVAAIARTVLFRRVRTVLIRPHGKGLIATTLNFDYEVRSSQE---AFEELP 184

Query: 185 AAGVSARELDMAQKLIDDMSDTWDPSKYHDTFRDDIMALVDRKVREGKTEEITDIEAPRE 244
              +    L++A+ +I     ++D S + D +   +  LV  K+ EG+   +   +AP  
Sbjct: 185 DLKIEGEMLELAEHIIGTKKGSFDASAFDDRYEAAVAELVKAKI-EGRA--LPKKKAPPA 241

Query: 245 SRQSADILDLSDLLKRSLGRGKSKPASGTRKRAAADETADEDSDSQEDSGSTASRKKPRT 304
           S+ S    DL   L+ S G      A    KR AA+   ++ +  Q+ + + A++ K   
Sbjct: 242 SKPS----DLLQALRESAG----VVAKAASKRTAAN--VNKGTSRQKVAKAAAAKTKSAA 291

Query: 305 TRSTRA 310
           +++ RA
Sbjct: 292 SQTRRA 297