Pairwise Alignments

Query, 597 a.a., ATP-binding cassette, subfamily B, MsbA from Paraburkholderia bryophila 376MFSha3.1

Subject, 582 a.a., Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  478 bits (1231), Expect = e-139
 Identities = 245/574 (42%), Positives = 381/574 (66%), Gaps = 6/574 (1%)

Query: 23  FRRLWPFIKPLLWVIVGAIVAMAVSAGTDAAIPALLKPLLDKGFGAHASDNAKWFVPAAV 82
           FRRLWP I P    ++ A +A+ ++A +D  + +LLKPLLD GFG        W +P  V
Sbjct: 13  FRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLW-MPLVV 71

Query: 83  IGLALIRGVSQYASGYLLAYVSNKILLELRLRMFDRMIHTSVAFFQRETASTVINAIVFE 142
           IGL ++RG++ Y S Y +++VS K+++ +R R+F  M+   VAFF +++  T+++ I ++
Sbjct: 72  IGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYD 131

Query: 143 VNQILNVLLGVMVTLVRDSLTVIFLLGYLFYLNWRLTLIVAVLLPGIGWLVGKINRRLRR 202
             Q+ +   G ++T+VR+  ++I L   +FY +W+L++I+ VL P +   +  +++R R 
Sbjct: 132 SEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRS 191

Query: 203 LNREHQLLTNELSYIVEETVGGYKVVKVHNGEKYEMDRFTSMSKRLRGYAMRMTVSGGLA 262
           +++  Q    +++   E+ + G+K V +  G++ E  RF  +S ++R   M+M  +  ++
Sbjct: 192 ISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSIS 251

Query: 263 QPLTQFLASIALAVVITIAVVQSSSDQTTVGGFVAFVTSMLLIISPLKHLMDVNQPLQRG 322
            P+ Q +AS+ALA V+  A   S  D  T G      +SM+ ++ PLK L +VN   QRG
Sbjct: 252 DPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRG 311

Query: 323 MTAAELIFGLIDEPAEPAGGGKPLERARGEVEFRNVSFMYSTNATHNRHTLDHVSFKVAP 382
           M A + +F ++D   E   G + ++RA G++EFRNV+F Y          L +++ K+  
Sbjct: 312 MAACQTLFAILDSEQEKDEGKRVIDRATGDLEFRNVTFTYPGREV---PALRNINLKIPA 368

Query: 383 GEMVALAGPSGSGKTTLVNLLPRFFDPTGGEILVDGVPIGDYDLHALRSQIAMVSQDVVL 442
           G+ VAL G SGSGK+T+ +L+ RF+D   G IL+DG  + +Y L +LR+Q+A+VSQ+V L
Sbjct: 369 GKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHL 428

Query: 443 FNDTVANNVAYGQTAD--RDKVNAALRAANLWDTVEAMPNGIDTLVGDNGMMLSGGQRQR 500
           FNDTVANN+AY +T +  R+++  A R A   D +  M NG+DT++G+NG++LSGGQRQR
Sbjct: 429 FNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQR 488

Query: 501 LAIARAIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERANRI 560
           +AIARA+ +D+PILILDEATSALD+ESER +QAAL+ L K RT+LVIAHRLSTIE+A+ I
Sbjct: 489 IAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEI 548

Query: 561 LVMEAGRIAESGSHRELLAQNGLYAHLHRIQFQQ 594
           +V+E G I E G+H ELLAQ+G+YA LH++QF Q
Sbjct: 549 VVVEDGIIVERGTHSELLAQHGVYAQLHKMQFGQ 582