Pairwise Alignments

Query, 581 a.a., Tfp pilus assembly protein PilF from Paraburkholderia bryophila 376MFSha3.1

Subject, 677 a.a., Lipopolysaccharide assembly protein B from Azospirillum sp. SherDot2

 Score =  163 bits (413), Expect = 2e-44
 Identities = 155/537 (28%), Positives = 217/537 (40%), Gaps = 25/537 (4%)

Query: 27  DALHQLGLAHFRDGALERACELLDQALNLAPDRADIWEHRGLLAALGGNRIAAEAFYHRA 86
           +A + LG A    G  E A +    AL   PD A+   + G +    G    AE     A
Sbjct: 128 EAANTLGNALNAQGKAEEAADAYRAALRARPDYAEAEGNLGTVLRSLGRSAEAEPLLRHA 187

Query: 87  LNLSGGSASIHRNLADCLKLSARLAEARQHYQTAVRFEPTLHHAVRALAQICTEQEQHAD 146
           +  +      H  L   L    R  E     +  +   P   HA  ALA   + Q + AD
Sbjct: 188 VAANPSLLEAHAALGLALLDLGRSEEGETALRAVLARRPD--HAPAALALAGSLQRRGAD 245

Query: 147 AANYWARAWALDSANIADAFMLIAALSKAQRDAEIGDLLPALRVRCSSDAAALQQLAFTL 206
           A     R   L+ A+         AL  A R A  GD          + A A+  L    
Sbjct: 246 ALPAHRRHLMLEPADAEGWNAHGLALQVADRIAPAGDAFTRALRLAPTMAEAMTNLGTVR 305

Query: 207 NSAHRFADAVSVTRQGISVEPNNAWLHHNASFALNMLGDFEHMQMHTAEAARLMPDNPSM 266
               R  ++  + R+ + + P  A  H N + AL  LGD    +     A    P     
Sbjct: 306 RLQGRIVESADLQRRALDLRPGYAAAHTNLALALQDLGDEAAAEREFTLALDADPAQALA 365

Query: 267 QFNLAASQLRAGDFERGWKQY--RWHDA-LPENHDLVRPDFPEWQGERVLGCRFLLIGEQ 323
           +FN +  QLR G    GW+ Y  R+    L   H L   + PEW G  + G R LL  EQ
Sbjct: 366 RFNRSLLQLRQGRLAEGWEDYAVRFESGRLKPKHPL---NIPEWDGGDLAGRRLLLWAEQ 422

Query: 324 GLGDQIQFLRMADWLHRRGAQVDVWVEEPLGDV-ARHAAGVHAAWTTAPPGPYDYWCRML 382
           GLGD++ F  +      R     V  E  L  +  R   G      T  P   D      
Sbjct: 423 GLGDELMFGALLPEALARFPGTIVECEPRLVPLFQRSFPGTTVRGPTRRPADADCHLGFG 482

Query: 383 SMPAHMKLDLPMLPLATTYVQAQPAAVQRWRDRMDALGPVAGQGPFTKRVGIVWAGNPAY 442
           S+P  +    P+ P    +++  P  V  WR R++ALGP         ++GI W      
Sbjct: 483 SLPRLLWPTAPLTPPPVGWLKPDPMRVAAWRSRLEALGP-------GLKIGIAWTSQRLT 535

Query: 443 ALDRYRSIGLQQWRPFLKQPGVRWFSLQKGEAQYDAAALSE--GIDMH---DLGPEIHDF 497
              R     L+ W P L+ PG+   SLQ    + + AA+ +  G+ +H   DL  +I D 
Sbjct: 536 TERRQSYTELEDWAPLLRLPGLHAVSLQYDGREAEIAAIEQRLGVCVHRWPDL-DQIADL 594

Query: 498 MDTLAIIQSLDLVVTVDTAVAHLAGACGTPVWVLVPTFTDWRWMAERADSPWYPSMR 554
             T A++ +LDLVVTV ++   +A A GTPVW L     DW  +   A  PW+PSMR
Sbjct: 595 EGTAALMANLDLVVTVASSAGEMAAALGTPVWRL--GRRDWTQLG-TAVRPWFPSMR 648



 Score = 41.6 bits (96), Expect = 1e-07
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 4/117 (3%)

Query: 13  SEALPAD----LDADSDADALHQLGLAHFRDGALERACELLDQALNLAPDRADIWEHRGL 68
           ++ALPA     +   +DA+  +  GLA      +  A +   +AL LAP  A+   + G 
Sbjct: 244 ADALPAHRRHLMLEPADAEGWNAHGLALQVADRIAPAGDAFTRALRLAPTMAEAMTNLGT 303

Query: 69  LAALGGNRIAAEAFYHRALNLSGGSASIHRNLADCLKLSARLAEARQHYQTAVRFEP 125
           +  L G  + +     RAL+L  G A+ H NLA  L+     A A + +  A+  +P
Sbjct: 304 VRRLQGRIVESADLQRRALDLRPGYAAAHTNLALALQDLGDEAAAEREFTLALDADP 360



 Score = 33.9 bits (76), Expect = 2e-05
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 2/103 (1%)

Query: 22  ADSDADALHQLGLAHFRDGALERACELLDQALNLAPDRADIWEHRGLLAALGGNRIAAEA 81
           A + A+A+  LG      G +  + +L  +AL+L P  A    +  L     G+  AAE 
Sbjct: 291 APTMAEAMTNLGTVRRLQGRIVESADLQRRALDLRPGYAAAHTNLALALQDLGDEAAAER 350

Query: 82  FYHRALNLSGGSASIHRNLADCLKLSARLAEARQHYQTAVRFE 124
            +  AL+     A    N +       RLAE  + Y  AVRFE
Sbjct: 351 EFTLALDADPAQALARFNRSLLQLRQGRLAEGWEDY--AVRFE 391



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 30/112 (26%), Positives = 40/112 (35%), Gaps = 7/112 (6%)

Query: 198 ALQQLAFTLNSAHRFADAVSVTRQGISVEPNNAWLHHNASFALNMLGDFEHMQMHTAEAA 257
           AL  L        RF DA  +  Q ++   +    H N ++AL  LG     +     A 
Sbjct: 61  ALHLLGMIACQTGRFTDAADLIGQAVAARRDVPDYHANLAYALQALGRSAEAERAARNAL 120

Query: 258 RLMPDNPSMQFNLAASQLRAGDFERGWKQYRWHDALPENHDLVRPDFPEWQG 309
           RL    P     L  +    G  E     YR   AL       RPD+ E +G
Sbjct: 121 RLRRPFPEAANTLGNALNAQGKAEEAADAYR--AAL-----RARPDYAEAEG 165