Pairwise Alignments

Query, 299 a.a., conserved protein found in conjugate transposon (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 298 a.a., Bacteroides conjugative transposon TraN protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  265 bits (678), Expect = 7e-76
 Identities = 132/265 (49%), Positives = 187/265 (70%), Gaps = 4/265 (1%)

Query: 35  ISPHKIEVTFQKTVHILFPSEVKYVDLGSFDIIADKATGAENVVRIKAAVKGFEGETNFS 94
           I P+++EVT+ KT H++FP+ ++YVDLGS  +IA KA  AENV+R+KA+VK FE ETNFS
Sbjct: 37  IEPYQMEVTYDKTSHLIFPTAIRYVDLGSEYLIAGKADDAENVLRVKASVKDFEQETNFS 96

Query: 95  VITADGCFYSFNVVYKDEPAQLSIEMEDWLRDNPEGGIAGDRMFVKLKELGGETPLVVNR 154
           VIT DG FYSFNV Y   P  LS ++   ++   E     D +F   +ELG  +P +   
Sbjct: 97  VITNDGRFYSFNVHYSANPLALSYDLLT-MQKAVEKANGNDVLF---EELGSSSPSLAGL 152

Query: 155 IMYTLYKKNKRDIRHIGCKKYGIQTLLKGLYINNDLLYLHTSLRNSSDISFDIDYIRFKV 214
           +M T+YKK+KR I+HIG K +GIQ +LKG+YI+N   Y HT +RN S++ F+ID+I FKV
Sbjct: 153 LMETIYKKDKRIIKHIGAKSFGIQFILKGIYIHNGKYYYHTEIRNKSNVPFEIDFINFKV 212

Query: 215 VDKKVAKRTAMQENFIEPVRTYNRLITVDGKATVRGIFVLPKLTLPDDKLLVVEVYEKGG 274
           VDK+VAKRT +QE  + P+RTY  L  + G  T + +F+L + T+ DDK+L +E++EK G
Sbjct: 213 VDKQVAKRTVVQERPLIPLRTYKPLGGISGNMTEQNVFLLDQFTIGDDKILQIEIFEKNG 272

Query: 275 ARHQSFRIENTDLVAAKPISELHLK 299
            RHQ+ ++EN DL+ A+ I ++HLK
Sbjct: 273 GRHQTLQVENLDLIKARLIDDMHLK 297