Pairwise Alignments

Query, 299 a.a., conserved protein found in conjugate transposon (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 281 a.a., Bacteroides conjugative transposon TraN protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  117 bits (294), Expect = 2e-31
 Identities = 86/294 (29%), Positives = 153/294 (52%), Gaps = 20/294 (6%)

Query: 1   MKTRIILSLVILLTVLSVKAQEPVETKIFPTNQIISPHKIEVTFQKTVHILFPSEVKYVD 60
           MK   +LSL+ L  V    AQ      I P   +++P+ +EV + +T  ++FP ++K  D
Sbjct: 1   MKKLCLLSLIALCFVSLAFAQ------IHP-KAVLAPYPVEVGWDQTTVLIFPGKIKSAD 53

Query: 61  LGSFDIIADKATGAENVVRIKAAVKGFEGETNFSVITADGCFYSFNVVYKDEPAQLSIEM 120
            G+ +++A K   A NV+++KA  +GF  E+N  V+T  G  Y F V Y  +P +L+I++
Sbjct: 54  RGNGNVLAQKDAYAANVLKLKAGKRGF-SESNLHVVTDRGKVYPFTVRYNPKPDKLTIDI 112

Query: 121 EDWLRDNPEGGIAGDRMFVKLKELGGETPLVVNRIMYTLYKKNKRDIRHIGCKKYGIQTL 180
               +   E  +A     ++  ++G   P  + R+   +++  ++   +   K   I+  
Sbjct: 113 GK--QQQVEAAVA----VLENTDIG---PEQLERLSGKVFQ--EKGFLYRSDKNGKIKLR 161

Query: 181 LKGLYINNDLLYLHTSLRNSSDISFDIDYIRFKVVDKKVAKRTAMQENFIEPV-RTYNRL 239
           L G+Y + ++L+    L+N S I++ I   RF V D+K  KRTA +   + P+   Y + 
Sbjct: 162 LAGIYSHKEVLFFLFELKNRSRIAYPIQQWRFTVQDRKQVKRTAERHVALTPLCMHYEKA 221

Query: 240 ITVDGKATVRGIFVLPKLTLPDDKLLVVEVYEKGGARHQSFRIENTDLVAAKPI 293
             +DGK   R +   P+ T+ D K +VV ++E+ G R     I+   L+ A+PI
Sbjct: 222 KGMDGKGENRLVVAFPQFTIADAKKMVVRLFEENGDRSPVLSIKGKHLLKARPI 275