Pairwise Alignments

Query, 393 a.a., putative mobilization protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 459 a.a., relaxase/mobilization nuclease domain-containing protein from Pectobacterium carotovorum WPP14

 Score = 47.4 bits (111), Expect = 9e-10
 Identities = 60/270 (22%), Positives = 103/270 (38%), Gaps = 46/270 (17%)

Query: 10  LNSHVRKPVIHISLNPSPKDILSKEQMTVLAQEFMEKFGYGNQPYIVW-LHEDIDRKHMH 68
           L   + KPV H SL     + L+  Q + +A ++M + G+       + LH+D   +H+H
Sbjct: 56  LRPDIAKPVWHNSLRLQKNEALTDAQWSEIADDYMARMGFSETHLRCYILHDDAAGQHIH 115

Query: 69  IISVRIN-EKGEKIDHNREAIRAQNICRDMEVKYGLHSTLGEHSERELL-----SLQKVD 122
           II+ R++ + G+      E + +  I + +E  Y L  T G  ++         SL +  
Sbjct: 116 IITSRVSLDAGKLYLGKNENLISTRIIQQLERDYSLTITKGPETKASPALPFPPSLSRKS 175

Query: 123 YPKGDVKAQVK----HTARTLLECYNCH-------------------SLAEYNTLLNLYN 159
            P+  + A  K         ++E Y                      S  E+ T L   N
Sbjct: 176 PPQKPMGATPKPKKLSRNEAMMEKYRGEPSPKSLIQEALEALLVGKPSTTEFVTQLVARN 235

Query: 160 VTVYEVRGSVDGKEYYGIMYGALDDDGQQAGTPFKSSKFGKVFGYEALQKKFAATAEK-- 217
           +TV     S      +   Y          G  FK+S+ GK + +  LQ K     E+  
Sbjct: 236 ITVVPNIASTGKMNGFSFEY---------QGIAFKASQLGKGYSWSTLQDKLDYQPERDN 286

Query: 218 -----VKRNSLAERARQEIVKAMQDISTKE 242
                +K  S+++ +  E +     I T E
Sbjct: 287 AFLLALKMPSVSKASVSEALDMTNAIDTPE 316