Pairwise Alignments

Query, 393 a.a., putative mobilization protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 398 a.a., Relaxase/Mobilisation nuclease domain. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  177 bits (450), Expect = 4e-49
 Identities = 106/297 (35%), Positives = 162/297 (54%), Gaps = 17/297 (5%)

Query: 4   FEPYIALNSHVRKPVIHISLNPSPKDILSKEQMTVLAQEFMEKFGYGNQPYIVWLHEDID 63
           F+  I  N+  +   +HISLN SP+D + +  +  + +++M   G+G QPY+V+ H D  
Sbjct: 51  FQKIIETNTRAKTNALHISLNFSPRDKVDEPLLWKITEDYMRGIGFGEQPYLVYRHFDAA 110

Query: 64  RKHMHIISVRINEKGEKID-HNREAIRAQNICRDMEVKYGLHSTLGEHSERE----LLSL 118
             H+H+++  I E G++I+ HN   ++++   +D+E +YGL     E  +R+    L SL
Sbjct: 111 HPHIHVVTTNIREDGQRIETHNLGRVQSEKTRKDIEQRYGL--VKAEEQQRKHVNLLQSL 168

Query: 119 QKVDYPKGDVKAQVKHTARTLLECYNCHSLAEYNTLLNLYNVTVYEVRGSVDGKEYY--G 176
            K +Y K + KA + +    ++  Y   SLAE N +L  +NVT Y  RG  D K Y   G
Sbjct: 169 DKAEYGKTETKAAISNIVGEVVRHYKFTSLAELNAILRQFNVTAY--RGEEDSKMYQKKG 226

Query: 177 IMYGALDDDGQQAGTPFKSSKFGKVFGYEALQKKFA--ATAEKVKRNSLAERARQEIVKA 234
           ++Y   D +G + G P K+S       Y+ L+ KF    TA K  RN L    R  +  A
Sbjct: 227 LIYSISDANGNRRGVPIKASSIYSKPTYKKLEMKFELNRTARKNYRNQL----RSTVNDA 282

Query: 235 MQDISTKEAFARRLKDADIEVVYRINPEGRLYGITFIDHTNRTVFNGSRLGKAFSAN 291
           +   S+ E    +L+   + +  R N EG++YGITF DH +R VFNGS LGK FSAN
Sbjct: 283 LTRSSSLEDLQVKLRKKGVHLTVRKNEEGKVYGITFTDHIHRCVFNGSSLGKEFSAN 339