Pairwise Alignments

Query, 393 a.a., putative mobilization protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 398 a.a., Relaxase/Mobilisation nuclease domain. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  182 bits (463), Expect = 1e-50
 Identities = 125/399 (31%), Positives = 190/399 (47%), Gaps = 58/399 (14%)

Query: 1   MQAFEPYIALNSHVRKPVIHISLNPSPKDILSKEQMTVLAQEFMEKFGYGNQPYIVWLHE 60
           +  F+  I  N+  +   +HISLN SP+D + +  +  +A+++M+  G+G QPY+V+ H 
Sbjct: 48  LMRFQEIIEANTRTKTNALHISLNFSPRDKMDETLLWKIAEDYMKGIGFGEQPYLVYRHF 107

Query: 61  DIDRKHMHIISVRINEKGEKID-HNREAIRAQNICRDMEVKYGLHSTLGEHSERE--LLS 117
           D    H+H+++  I E G++I+ HN   I+++   +D+E +YGL     +  +R   L  
Sbjct: 108 DAAHPHIHLVTTNIRENGQRIETHNLGRIQSEKARKDIEQRYGLVKAEEQQRKRVNLLQP 167

Query: 118 LQKVDYPKGDVKAQVKHTARTLLECYNCHSLAEYNTLLNLYNVTVYEVRGSVDGKEYY-- 175
           L K +Y K + KA + +    ++  Y   SLAE N +L  +NVT Y  RG  D K Y   
Sbjct: 168 LDKAEYGKTETKAAISNIVGEVVRHYKFTSLAELNAILRQFNVTAY--RGEEDSKMYQKK 225

Query: 176 GIMYGALDDDGQQAGTPFKSSKFGKVFGYEALQKKFA--ATAEKVKRNSLAERARQEIVK 233
           G++Y   D DG + G P K+S       Y+ L+KKF    TA K  R  L    +  +  
Sbjct: 226 GLIYCISDADGNRKGVPIKASSIYSKPTYKKLEKKFELNRTARKPYRGQL----QSTVSH 281

Query: 234 AMQDISTKEAFARRLKDADIEVVYRINPEGRLYGITFIDHTNRTVFNGSRLGKAFSANVF 293
           A+   S+ E     L+   + +  R N EGR+YGITF DH +R VFNGS LGK FSAN  
Sbjct: 282 ALTRSSSLEDLQVELRKKGVHLTVRKNEEGRIYGITFTDHIHRCVFNGSSLGKEFSANSI 341

Query: 294 NELFNNPDADRTKLIPPPEQDTPRQARETDAEERQEREEYRQQENRGNYQSEPSGSLIDT 353
            +                     +   ET AE++Q RE      + G   S+ SG     
Sbjct: 342 QKAL-----------------MVKSTNETQAEKQQSREIRSLSPSTG---SQTSG----- 376

Query: 354 SALGAIDIFSVLMEDDHTHEYIDPAFRFGHKKKKKRRRR 392
                               Y    +    KKKKK+R++
Sbjct: 377 --------------------YEPTPYELSQKKKKKKRKK 395