Pairwise Alignments

Query, 195 a.a., RNA polymerase ECF-type sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 196 a.a., RNA polymerase ECF-type sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 75.1 bits (183), Expect = 8e-19
 Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 10/184 (5%)

Query: 13  ELKNGSFQAFERLYNMYSGKLYNFIMRISSGNQYMAEEVVQSAFIRVWEVRERVEPESSF 72
           +++ G  +AF +LYN YS  LY + M+I+ G+  +  E +QS F+ ++E R+      S 
Sbjct: 8   KIQQGDEEAFRQLYNEYSDLLYGYGMKIA-GDDNLVTESIQSLFVYLYEKRQSCSEPQSI 66

Query: 73  ISFLCTIAKNLLMNMYQRQTVEYVY--------NEYLKNTGVDRDSQTEESIDLRFLNEY 124
            ++LC   K +L+N  ++ T   V+        +EY  +  +D ++    S   R   E 
Sbjct: 67  SAYLCVALKRMLLNELKK-TANGVFTSLDEVNSSEYRFDLEIDIETAIVRSELEREQLEV 125

Query: 125 IDSLAEELPAQRKKIFILSKRQNYTNKEIAEMMGISESTVATQLSLAVKFMREQLMKHYD 184
           +      L  Q++++  L   +   + EIAE+MG++  TV     +A+  +RE+L K + 
Sbjct: 126 LQKEINGLTKQQREVLYLKYYKKLDSDEIAEVMGLTSRTVYNTTHMAISRLRERLSKSFL 185

Query: 185 KIVA 188
             VA
Sbjct: 186 LTVA 189