Pairwise Alignments

Query, 307 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 384 a.a., Fe2+-dicitrate sensor, membrane component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  117 bits (292), Expect = 6e-31
 Identities = 76/228 (33%), Positives = 123/228 (53%), Gaps = 11/228 (4%)

Query: 70  GYLYWGATDTEEKYAEVMAATGSVI---RYE--LPDHSVVWLNSGSTLRYPTVFKK-DNR 123
           G L +   D E+   E    T +V    R+E  LPD + V LN+GS+L YPT F+    R
Sbjct: 150 GKLIYLGNDAEQSSGEPGYNTLTVPYAKRFEIILPDSTHVTLNAGSSLTYPTSFENMATR 209

Query: 124 NVELKGEAYFEVEADRKRPFYVNTPAGLSVYVYGTKFNVNAYEDDNSIETVLEKGKVNVI 183
            V L GE YF V+ D+  PF VN    ++V V GT+FN++ Y +DN I+T L +GKV++ 
Sbjct: 210 KVALIGEGYFNVKKDKAHPFIVNA-GKMNVRVLGTQFNLSTYPEDNLIQTALVEGKVSIY 268

Query: 184 SPDGKTTVQLAP----GERLLYNKVDQKLLKGKVDVYEKVAWKDGKLIFRNAELGEIFKR 239
             D     + +P    G   +++K  + L   +  +    AW  GK+IF+N     I K+
Sbjct: 269 GDDEPYRPEASPVLHAGHLAIWDKTSKDLQINETSLDMYTAWLSGKIIFKNVPFENIIKK 328

Query: 240 LARHFNVDIQFNNISGKEYKYRATFRNETLPQILDYLAKSAALKWRTE 287
           L RH+NV+I   + +     Y A+F  E++ ++++   ++  L+++ E
Sbjct: 329 LERHYNVEIINLDGALAHEHYTASFDVESIEEVMETFKRAYGLQYQIE 376