Pairwise Alignments

Query, 307 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 341 a.a., Fe2+-dicitrate sensor, membrane component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  132 bits (332), Expect = 1e-35
 Identities = 87/247 (35%), Positives = 129/247 (52%), Gaps = 11/247 (4%)

Query: 40  KTNRRRSMYNQLMRYAAFLTIPLLLSSLILGYLYWGATDTEEKYAEVMAA------TGSV 93
           + N+R        + AA L I L LS  +LGY Y+   +      EV+A        G  
Sbjct: 80  EVNKRIDQRGMGFKIAAGLAIFLSLS--LLGYEYFWGKNAGSLPTEVVAMHVKSNPAGQK 137

Query: 94  IRYELPDHSVVWLNSGSTLRYPTVFKKDNRNVELKGEAYFEVEADRKRPFYVNTPAGLSV 153
            + +LPD ++++LN+ STL YP  F   NR+V+L GEA+FEV  D   PF V +  G+  
Sbjct: 138 SKLKLPDGTIIYLNAASTLTYPADFAT-NRHVKLLGEAFFEVFPDEAHPFSVESN-GVRT 195

Query: 154 YVYGTKFNVNAYEDDNSIETVLEKGKVNVISPDGKTTVQLAPGERLLYNKVDQKLLKGKV 213
              GT FN+ A+ D    E  L  GKV V + D    ++L PG+ ++ N+   +L K  V
Sbjct: 196 VALGTAFNIKAFPDMKDTEVALAHGKVRVEALDNSGQLELRPGQAVIANEQSGELQKKNV 255

Query: 214 DVYEKVAWKDGKLIFRNAELGEIFKRLARHFNVDIQFNNISGKEYKYRATF-RNETLPQI 272
           ++ E + WK+G L F      E+ + L R +NV IQ N  +GK ++   TF +NE L  +
Sbjct: 256 NIQEVLFWKEGILHFDGMPFEEVVRTLERWYNVSIQVNGATGKGFQCSGTFDKNEYLDNV 315

Query: 273 LDYLAKS 279
           L+ L  S
Sbjct: 316 LNILGHS 322