Pairwise Alignments

Query, 307 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 345 a.a., Fe2+-dicitrate sensor, membrane component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  110 bits (276), Expect = 4e-29
 Identities = 82/247 (33%), Positives = 117/247 (47%), Gaps = 6/247 (2%)

Query: 44  RRSMYNQLMRYAAFLTIPLLLSSLILGYLYWG---ATDTEEKYAEVMAATGSVIRYELPD 100
           R++ + Q ++ AA L   LL++ LI G +          E  +       G      L D
Sbjct: 92  RKAFFGQWLKVAAILVFCLLIA-LIGGKVIIDPPIGPKQEITWKTTENPRGRKSTIHLQD 150

Query: 101 HSVVWLNSGSTLRYPTVFKKDNRNVELKGEAYFEVEADRKRPFYVNTPAGLSVYVYGTKF 160
            +VV LN  S L +P  F+   R V L GEA+FEV  D  RPF V T  G+   V GT F
Sbjct: 151 GTVVHLNYESNLTFPAHFEPHQRRVILNGEAFFEVSHDPSRPFIVQT-TGMETQVLGTSF 209

Query: 161 NVNAYEDDNSIETVLEKGKVNVISPDGKTTVQLAPGERLLYNKVDQKLLKGKVDVYEKVA 220
           N+ A +  ++ E  L  GKV V   D  T   L PG++L YN     L K   +V    A
Sbjct: 210 NIKAPKYSHNTEVSLVSGKVKV-KGDHLTEHFLTPGQQLSYNDQSGLLKKRPFEVSLVTA 268

Query: 221 WKDGKLIFRNAELGEIFKRLARHFNVDIQFNNISGKEYKYRATFRNETLPQILDYLAKSA 280
           WK+G +IF +    E   +L++ + VD Q    + K++K    + NE L  IL  +    
Sbjct: 269 WKEGVMIFTDTGFEEFIDQLSKWYGVDFQVYGDTPKDWKVNGRYENEKLEDILTGMQFMY 328

Query: 281 ALKWRTE 287
            LK+R +
Sbjct: 329 DLKFRID 335