Pairwise Alignments

Query, 307 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 387 a.a., sigma factor regulatory protein, FecR/PupR family from Bacteroides ovatus ATCC 8483

 Score =  113 bits (282), Expect = 8e-30
 Identities = 67/169 (39%), Positives = 93/169 (55%), Gaps = 3/169 (1%)

Query: 91  GSVIRYELPDHSVVWLNSGSTLRYPTVFKKDNRNVELKGEAYFEVEADRKRPFYVNTPAG 150
           G   +  L D + VWLN+ S   YPT F  D R V L+GEAYF+V  D +RPF V T   
Sbjct: 186 GESFKVVLCDGTEVWLNANSNFVYPTAFIGDERIVTLEGEAYFKVTKDPERPFIVKTKT- 244

Query: 151 LSVYVYGTKFNVNAYEDDNSIETVLEKGKVNVISPDGKTTVQLAPGERLLYNKVDQKLLK 210
           +   V GT+FN+ +Y  +++   VL  GKV V +  G +  +L PGE   + + D   + 
Sbjct: 245 VQTRVLGTEFNIRSYTPEDT-HVVLINGKVEVSNTKGGSYTRLYPGED-AHLQSDGNFIL 302

Query: 211 GKVDVYEKVAWKDGKLIFRNAELGEIFKRLARHFNVDIQFNNISGKEYK 259
            +VD+   V WKDG   F N  L +I + L R +NV+I+F N    EYK
Sbjct: 303 AEVDLDSYVYWKDGYFYFDNVTLKDIMQNLGRWYNVNIEFRNKEAMEYK 351