Pairwise Alignments

Query, 557 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 556 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  102 bits (255), Expect = 3e-26
 Identities = 132/492 (26%), Positives = 200/492 (40%), Gaps = 62/492 (12%)

Query: 78  GSGNEN----FRIIPTNSFPTTQSEVQQTWAALYTGIYRANDFLERISNKIGSYTTTDKK 133
           G+G++N      I  TN    T ++V + W ALY G+ RAN  L  + N      + D  
Sbjct: 93  GTGDQNQIHQMEIFNTNP---TITDVNRKWLALYEGVKRANYALRLLQNS----ESFDAD 145

Query: 134 LATLYIAEARALRGMFYFELVRRFGNVVLMTS-TQMSNQNPATYVQSAPEKVYEYIEDDL 192
           L      E R LRG FYFEL + + NV  +    +  +      +    E+++  IE+D 
Sbjct: 146 LKQSREGELRFLRGHFYFELKKIYHNVPYIDEQAETVDDYYVGNIALTDEELWSKIEEDF 205

Query: 193 LYACDILPYATDDQYRESNDYRFSKGAALGLLTKVYATWAGYPVKDESKWEAAAKTARIL 252
             A ++LP    D  R        K AA   L K YA         + KW+A    A  +
Sbjct: 206 NAAFEMLPADQADAGRPD------KFAAKAYLAKTYAF--------QEKWQACLDAANEV 251

Query: 253 VESGKHGLLKDYEQLWKNTCNGTWDPTESLIEISFYSPTVSGNSDPVGRIGKWNGVKTTA 312
           + SGK+ LL  +  ++        D +E +I    +S      S+  G IG         
Sbjct: 252 IASGKYALLPHFRDVFLPEN----DNSEEIIFAVQHSVNDGEPSNYNGSIGDRLSAPGGP 307

Query: 313 IAGVRGSCAANVKVVHTFVLDWREDVSDIRRDLSIANYQYTDTKKSLWVAGASDTD---- 368
                G    +  +++ F  +  E +  +   L+  ++       ++   G    D    
Sbjct: 308 YYNQYGFHRPSQNLINAFETN-AEGMPVLGDQLAEGDFLDPRLDHTVGRPGIPYLDLDIL 366

Query: 369 -ESAAEKDADPTKAQKNKQNYTPAKWDIQKYVTTNSFINNDKSNVNWYFLRYADVLLLYA 427
            E++  +D         K+    A  D+Q    T  +I    S +N+Y +RYAD+LL  A
Sbjct: 367 YEASWARDLATYGPFAPKKRIVSALSDLQ--TPTWPYI----SALNYYIIRYADLLLWKA 420

Query: 428 EALNEWKHGPDAEAYNAINAVRRRGYGNPSNTSA-CDLPQG-----------LDETSFRE 475
           EA  +   G    A   +N VR R  G+   T    D P              D    +E
Sbjct: 421 EA--QVALGDLEGARATVNEVRGRAAGSQVVTQLDSDQPADNYRVAMYDEPWTDAAQAQE 478

Query: 476 AVRKERSYELSFEGHRRQDLIRWGIYYKTVQATAKELGYWWEGTGSPNYSVATYTEEGKH 535
            VR ER  EL+ EGHR  DL+RWG+  +T+        Y  E     ++ V      GKH
Sbjct: 479 LVRLERRLELAMEGHRFFDLVRWGVAAETMN------HYLEEEKQIRSHLVNATFVAGKH 532

Query: 536 ELFPIPQRDMDL 547
           E FPIPQ  +D+
Sbjct: 533 EYFPIPQTYLDM 544