Pairwise Alignments

Query, 557 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 554 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 97.1 bits (240), Expect = 2e-24
 Identities = 116/432 (26%), Positives = 187/432 (43%), Gaps = 56/432 (12%)

Query: 82  ENFRIIPTNSFPTTQSEVQQTWAALYTGIYRANDFLERISNKIGSYTTTDKKLATLYIAE 141
           EN R   T   P    E   +W + Y  + ++N  +  I    G   T   ++    IAE
Sbjct: 88  ENVRFNTTGETP----ENGASWRSFYNVVGQSNTLINNIEQHAGEEVTD--RIRRHGIAE 141

Query: 142 ARALRGMFYFELVRRFGNVVLMTSTQMSNQNPATYVQSAPEKVYEYIEDDLLYACDILPY 201
            R +RG+ Y+ LV+ +G V ++T+     Q+  T  ++  E V+++I  D  YA D LP 
Sbjct: 142 GRFMRGLAYYYLVQNWGPVPIITNNTTLLQD-TTIARNTVETVWQFIIKDFRYAVDNLPE 200

Query: 202 ATDDQYRESNDYRFSKGAALGLLTKVYATWAGYP-VKDESKWEAAAKTARILVESGKHGL 260
           ++        + R +K +A G+L K+Y T AG    +D+   ++AA  A+ ++++    L
Sbjct: 201 SS------VQEGRLNKWSAEGMLAKMYLTRAGISGSRDQDDLDSAAYFAKRVIDNSGATL 254

Query: 261 LKDYEQLWKNTCNGTWDPTESLIEISFYSPTVS--GNSDPVGRIGKWNGVKTTAIAGVRG 318
           ++DYE L+K T N     T + ++ ++ +  ++  G  + V     + G + T  +   G
Sbjct: 255 MEDYEDLFK-TANNNNQETLAALQWTYNAGNLNAWGAQNSVQAFLAF-GSEITGFSDGWG 312

Query: 319 SCAANVKVVHTFVLDWREDVSDIRRDLSIA----NYQYTDTKKSLWVAGASDTDESAAEK 374
                 K V     DW   V D RR  +      +Y Y         AG S      A++
Sbjct: 313 GDIGGSKWVLDLYDDW---VFDERRKATFMFPGDHYDYITQVP----AGGS------AQE 359

Query: 375 DADPTKAQKNKQNYTPAKWDIQKYVTTNSFINNDK-----SNVNWYFLRYADVLLLYAEA 429
              P  ++   Q Y    W ++KYV      N+ K     + +N Y LR +DV L+YAEA
Sbjct: 360 LRVPAPSEDAGQPYGTRAW-VKKYVVGRPEDNDGKVVQQGTEINTYILRLSDVYLIYAEA 418

Query: 430 LNEWKHGPDAEAYNAINAVRRRGYGNPSNTSACDLPQGLDETSFREAVRKERSYELSFEG 489
           + E      AEA    N VR R  G  + TS              E +  ER  E + EG
Sbjct: 419 MLE---TDPAEALTYYNMVRERA-GVSTKTSIT-----------WEDIFNERILEFAMEG 463

Query: 490 HRRQDLIRWGIY 501
               +  R   Y
Sbjct: 464 QAWYEFTRLQYY 475