Pairwise Alignments

Query, 557 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 495 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 129/509 (25%), Positives = 205/509 (40%), Gaps = 89/509 (17%)

Query: 1   MKKIIYYIAMSVMCLLPFSCS--LEEETRTEVEKKNYMNNAEEAKDVLLGVYRTNTLDAM 58
           +KK I Y  +++M +   SC   L++  +  V K+++    E+ +  L+G Y +  L+  
Sbjct: 2   LKKYISYTLLALMIVAGTSCDSWLDQRPQNGVVKQDFWKTKEQVRSALMGAYAS--LNGN 59

Query: 59  Y-GYYLSILFNLGTDIS--QVEGSGNENFRIIPTNSFPTTQSEVQQTWAALYTGIYRAND 115
           Y GY+LS    L  ++    +  S    F  I         +     W   Y  I   N+
Sbjct: 60  YRGYHLSERMFLWGELRGYMIAPSTGARFEDIQVQLGNIQSTNSIADWGGFYGTINLCNN 119

Query: 116 FLERISNKIGSYTTTDKKLATLYIAEARALRGMFYFELVRRFGNVVLMTSTQMSNQNPAT 175
            ++     + +  T  ++    Y+AEARALR + YF LVR FG V L      S+++  T
Sbjct: 120 VIDNGPGALETDETFQEEDLNNYVAEARALRALMYFYLVRTFGEVPLSIEAVDSDEDQLT 179

Query: 176 YVQSAPEKVYEYIEDDLLYA-CDILPYATDDQYRESNDYRFSKGAALGLLTKVYATWAGY 234
             +S+  +V E I  DL  A  DI  +   +  RES   R ++ A   L   VY     Y
Sbjct: 180 IAKSSQAEVLEQIVTDLEMAEADI--FEQHENSRESKG-RMTRYAVNALQADVYLWMQNY 236

Query: 235 PVKDESKWEAAAKTARILVESGKHGLLKDYEQLWKNTCNGTWDPTESLIEISFYSPTVSG 294
                   EAAA+ A   V +G + L+   ++ W        +  ES+ EI + +P  + 
Sbjct: 237 --------EAAAEAAD-KVLAGPYALVT--QENWMRALFVEGNSVESIFEIQYEAPQSNT 285

Query: 295 NSDPVGRIGKWNGVKTTAIAGVRGSCAANVKVVHTFVLDWREDVSDIRRDLSIANYQYTD 354
             D       ++  + T           N      F +D  ED+     DL   +     
Sbjct: 286 FFD------MFSTTRITRFLAYPSVLEEN----FGFSIDQPEDI-----DLRSIDATLKS 330

Query: 355 TKKSLWVAGASDTDESAAEKDADPTKAQKNKQNYTPAKWDIQKYVTTNSFINNDKSNVNW 414
           + +     G S+T                            Q+   T+S+        NW
Sbjct: 331 SGEIWKYIGVSET----------------------------QRRQPTDSY-------ANW 355

Query: 415 YFLRYADVLLLYAEALNEWKHGPDAEAYNAINAVRRRGYG------NPSNTSACDLPQGL 468
              R ADV+L+ AEAL++   G   EA   +  +R RG        NPS +SA D+ +  
Sbjct: 356 IVYRLADVMLMKAEALSQIGRG--EEALEIVAEIRERGGAIQATEENPSPSSANDVIR-- 411

Query: 469 DETSFREAVRKERSYELSFEGHRRQDLIR 497
                   V +ER+ EL+FEG    DL+R
Sbjct: 412 -------YVLRERARELAFEGKWWFDLLR 433