Pairwise Alignments

Query, 557 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 528 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  181 bits (458), Expect = 8e-50
 Identities = 167/568 (29%), Positives = 253/568 (44%), Gaps = 66/568 (11%)

Query: 7   YIAMSVMCLLPFSCSLEEETRTEVEKKNYM----NNAEEAKDVLLGVYRTNTLDAMYGYY 62
           YI + ++ +L  SC    E     E  N++    +   E +  L GVY      A YG  
Sbjct: 6   YIFIFLLGILGTSC----EDFLSTEPTNFIAPEYSTIAELETGLAGVYDVLGSQATYGDV 61

Query: 63  LSILFNLGTDISQVEGSGNENFRIIPTNSFPTTQSEVQQT--WAALYTGIYRANDFLERI 120
           +    N+ TDI      G  N   + T ++  T ++ Q T  W  LY GIYRAN  L ++
Sbjct: 62  IPYWLNVSTDI------GYTNTGQLNTTAYIYTATDAQITNLWKTLYQGIYRANLVLAKV 115

Query: 121 SNKIGSYTTTDKKLATLYIAEARALRGMFYFELVRRFGNVVLMTSTQMSNQNPATYVQSA 180
            N        D++       +A  LRG +YF LV+ +G+V ++ + +    N     +S 
Sbjct: 116 DNP-----ELDEEARNRIKGQALFLRGYYYFLLVKNYGSVPMLLTDKPDISN-VNIPRSP 169

Query: 181 PEKVYEYIEDDLLYACDILPYATDDQYRESNDYRFSKGAALGLLTKVYATWAGYPVKDES 240
            E VY  I  D+  A  ++    ++    S   R S+    G+L +V  T AG+P+KDES
Sbjct: 170 VEDVYTQILQDMKEAESLV----EEAEHLSGGGRISRSTVQGILARVCLTMAGHPLKDES 225

Query: 241 KWEAAAKTARILVESGKHGLLKDYEQLWKNTCNGTWDPTESLIEISFYSPTVSGNSDPVG 300
           ++  A + A+ + +S  H L  DY  ++       +D  ES+ E+ FY    SG+ +   
Sbjct: 226 RYAEALEWAQKVQKSKMHELNPDYSNVFIRYARDEYDIKESIWEVEFYGLLSSGSQEYTY 285

Query: 301 RIGKWNGVKT--TAIAGVRGSCAANVKVVHTFVLD-----WREDVSDIRRDLSIANYQYT 353
            IG   G+++    I    G+  A   +   + +D       ++  D+RRD +IA + Y 
Sbjct: 286 YIGARGGIRSGDEQIGYSGGAVLATKWLFDLYEIDEGSTETPKESPDLRRDWNIAPFTY- 344

Query: 354 DTKKSLWVAGASDTDESAAEKDADPTKAQKNKQNYTPAKWDIQKYVTTNSFINNDKSNVN 413
                + V G    +     +              T  KW  ++   T +  +   S  N
Sbjct: 345 -----VGVPGVQTYNPDLWRR--------------TMGKW--RREYETLTPKDRVVSAQN 383

Query: 414 WYFLRYADVLLLYAEALNEWKHGPDAEAYNAINAVRRRGYG-----NPSNTSACDLPQGL 468
           +  LRY+DVLL+ AEA NE  +GP   AY AIN VRRR YG      P+     DLP GL
Sbjct: 384 FPILRYSDVLLMIAEAENE-VNGPTDVAYEAINQVRRRAYGLLLPAPPNPDVNADLPPGL 442

Query: 469 DETSFREAVRKERSYELSFEGHRRQDLIRWGIYYKTVQATAKELGYWWEGTGSPNYSVAT 528
            +  F +A+  ER+ E  FE  RR D IRWG +   +    KE   W    G+    V  
Sbjct: 443 SKEEFFQAIVDERAREFCFEASRRSDYIRWGTFVDRM----KEYKDWALANGAVQGHVLA 498

Query: 529 YTE-EGKHELFPIPQRDMDLCIQFNQNP 555
            T    ++ L PIP  +M L     QNP
Sbjct: 499 QTNISERNYLLPIPTAEMALNKALTQNP 526