Pairwise Alignments

Query, 557 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 473 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  127 bits (319), Expect = 1e-33
 Identities = 156/560 (27%), Positives = 249/560 (44%), Gaps = 103/560 (18%)

Query: 7   YIAMSVMCLLPFSCS--LEEETRTEVEKKNYMNNAEEAKDVLLGVYRTNTLDAMYGYYLS 64
           YI + ++ L   SC+  LE E   ++  KNY     + +  +LG+Y +       G Y S
Sbjct: 4   YIFILLLLLAFTSCADFLELEPENQINDKNYYLTENDFETSMLGIYAS-----FKGLYTS 58

Query: 65  ILFNLG---TDISQVEGSGNENFRIIPTNSFPTTQSEV-QQTW-AALYTGIYRANDFLER 119
            +F +G   +D +++  S +    +       T+++ + +  W  ALYT + R N  + R
Sbjct: 59  EMFYIGELTSDNAEISISSSSAAEVEFDEMIITSENPIIENAWNKALYT-VARCNVIINR 117

Query: 120 ISNKIGSYTTTDKKLATLYIAEARALRGMFYFELVRRFGNVVLMTSTQMSNQN--PATYV 177
           ++         D+++    + EAR +R   YF LV+ FG   +      S +    +   
Sbjct: 118 LNT-----ANIDQEVNDRIMGEARFIRAFCYFFLVQTFGKAPVADVEFRSPEEIYASDLS 172

Query: 178 QSAPEKVYEYIEDDLLYACDILPYATDDQYRESNDYRFSKGAALGLLTKVYATWAGYPVK 237
             + E+VY  IE DL  A  +LP A +        Y  S G    LL KVY T       
Sbjct: 173 LKSKEEVYTMIEIDLKDAESLLPEAMNPD----KGY-VSVGTVKTLLGKVYLT------- 220

Query: 238 DESKWEAAAKTARILVESGKHGLLKDYEQLWKNTCNGTWDPTESLIEISFYSPTVSGNSD 297
            + K++ AA   + +++S  + L+ DY+ L+     G  + +ES+ E+ F S    GN  
Sbjct: 221 -QKKYDLAAPKLKEVIDSKDYSLVDDYKSLFSA---GNENLSESIFELKFISGDNLGN-- 274

Query: 298 PVGRIGKWNGVKTTAIAGVRGSCAANVKVVHTFVLDWREDVSDIRRDLSIAN-YQYTDTK 356
                 +++ + T A  G+              + + ++    I   L + N Y+  + K
Sbjct: 275 ------QYSVLFTPATVGL--------------LANNQQGSGRINPTLDLMNAYEEGERK 314

Query: 357 KSLWVAGASDTDESAAEKDADPTKAQKNKQNYTPAKWDIQKYVTTNSFINNDKSNVNWYF 416
           +    A   DT   A+E+        K              +V  N   N    ++N+  
Sbjct: 315 R----ASVGDTIAPASEEKFYARHGLK--------------FVDLN-LENPRDGSINFTV 355

Query: 417 LRYADVLLLYAEALNEWKHGPDAEAYNAINAVRRRGYGNPSNTSACDLPQGLDETSFREA 476
           LRYADVLL+YAEALNE     DAE Y  INAVR R   +P          GL +   REA
Sbjct: 356 LRYADVLLMYAEALNEQGKPEDAEEY--INAVRDRVDLSPH--------LGLSQEDMREA 405

Query: 477 VRKERSYELSFEGHRRQDLIRWGIYYKTVQATAKELGYWWEGTGSPNYSVATYTEEGKHE 536
           +  ER  EL+FE HR  DL+R      T +A  +E+  +++  G  N+SV        HE
Sbjct: 406 IAHERRVELAFEAHRWFDLVR------TARA-QEEIDDYFKNKG-VNFSVK------DHE 451

Query: 537 L-FPIPQRDMDLCIQFNQNP 555
           L  PIPQR++++  +  QNP
Sbjct: 452 LIMPIPQREIEINPEMKQNP 471