Pairwise Alignments

Query, 183 a.a., RNA polymerase ECF-type sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 181 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 97.1 bits (240), Expect = 2e-25
 Identities = 52/176 (29%), Positives = 97/176 (55%), Gaps = 1/176 (0%)

Query: 4   ELLILTKIKAGDIKAFEELFRCYYSPLCWYAASITGRMEVAEEIVEELFYVLWKDREQLQ 63
           E  +L +IK G+  AF E++  Y+  L         + E+ E +V+E+F  +W+ R  L 
Sbjct: 5   ETRLLEQIKKGNEMAFVEVYDKYWKQLFNSGYKRFQKKEIVEGLVQEVFVEMWQKRASLM 64

Query: 64  IFQSVKNYLYRATRNQSIQYCEHEEVKERYRESVLTASSSEQVTDPHQQMEYEELQKLIN 123
           +  S+  YL+ A + + I   + + VKE+Y  + +T+  S   ++  +++ Y+EL +   
Sbjct: 65  VHTSLGAYLFTALKYKVINQMKSQMVKEKY-VAFVTSRKSNFGSEVEEKIFYKELDEAYK 123

Query: 124 NTLEKLPERRMQIFKMHRTEGKKYAEIAVQLSLSVKTVEAEMTKTLRTLRKEIENY 179
             +  LP +  +++++  TEG  Y EI+ ++ +SV TVE  M K L+ LR+ + NY
Sbjct: 124 QEIANLPSQAKRVYELKNTEGLSYVEISQEMGISVSTVEKHMIKALKILRQNLRNY 179