Pairwise Alignments

Query, 299 a.a., mobilization protein BmgA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 396 a.a., relaxase from Pseudomonas simiae WCS417

 Score = 48.1 bits (113), Expect = 3e-10
 Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 27/211 (12%)

Query: 57  KVKSPVKHVSLAFSSQDISRFPDNEEGDALMVEIAKKWMEQMGIRN-TQYIIARHHDTKH 115
           +V  PV H  LA         P     D    E  + ++  +G  +  +++   H DT H
Sbjct: 79  RVVKPVWHAILALP-------PGEHLDDQQWREAIEMYLSDLGFSDLNKWVAVLHGDTDH 131

Query: 116 PHCHLVFNRI--DNEGNLISDSNERIRNAKVCRALTKEYGFYFAPKNSK------ARNKS 167
            H H+V NRI  D E +++ DSNER R+      +   +G   AP  S+      +RN  
Sbjct: 132 EHVHIVANRIRLDEEFSMVKDSNERSRSCDSKSKIEDNFGLSKAPAPSETWGTAISRNAL 191

Query: 168 RLRPHQ---LRKYNLRSSVLDA----QVNSRSWNDFISTLKGQGIDMRF-NHAENSDKIR 219
                +     K+ + + +  A    Q         I  L+ Q I + F  +AE      
Sbjct: 192 EAAEREGTIALKHRMIAKIAGAVEACQAQGGDMFMLIQLLRRQQIYVHFTKNAEGQP--T 249

Query: 220 GISFCMDEFSIAGSKLDRD-LSFNNLCTMLG 249
           GIS+  +   I+G KL R  L+F  L    G
Sbjct: 250 GISYEYNGTIISGRKLKRSRLTFQKLTQQEG 280