Pairwise Alignments

Query, 372 a.a., integrase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 369 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 15/217 (6%)

Query: 155 ISRNSAVGYWSTFRGFLKILYRNKLIHSNVNDFLDKIEPEDVVKDYLSVDELYRLAETPC 214
           I R  +V Y S     +K+ +  K       + + +      + + LS +E+ R+ E   
Sbjct: 150 IDRQYSVSYQSQVINAIKLFFNIKQNRKLDPEVVSRPRKPSKLPNVLSKEEVKRILEAHK 209

Query: 215 KIPVLKTASL-FSCLTSLRISDILTLRWEEIVDFAAGGKCVHTVTQKTKTEDIIPISDEA 273
            I      S+ ++C   LR S++L L+  + VD   G   V     K K + ++P+SD+ 
Sbjct: 210 NIKHRTMLSIIYAC--GLRRSEVLHLKISD-VDSKRGLLIVRQ--SKGKKDRVVPLSDKT 264

Query: 274 LQLIG--YSPEKTGLVFKGLKRCWTQYP-------MKEWIRAAGITKNITFHSYRRTFAT 324
           + L+   Y  E+        K+  ++Y        +K  +  +GI K +T H  R +FAT
Sbjct: 265 IALLREYYKYERPQYFLFXGKKLNSKYSSGSLQKILKSALGKSGIKKPVTLHWLRHSFAT 324

Query: 325 LQAAAGTDIRTIQSIMAHKSITTTQRYMKVVDSNKRK 361
                GTD+R IQ I+ H S  TT+ Y  V D++ RK
Sbjct: 325 HLLENGTDLRYIQEILGHNSSRTTEIYTHVTDNSIRK 361