Pairwise Alignments

Query, 549 a.a., ribosomal large subunit pseudouridine synthase A (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 211 a.a., Dual-specificity RNA pseudouridine synthase RluA from Pseudomonas sp. RS175

 Score =  135 bits (341), Expect = 1e-36
 Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 17/216 (7%)

Query: 341 LEIVFEDEWLVVVNKPSGMLSVPGKEEET-DSVYHRVKAK-YPEATGPMIVHRLDMATSG 398
           + I+ +D  ++VV+KP+ +LSVPG+ ++  D +  R++   YPEA    IVHRLD  TSG
Sbjct: 6   IRIIHQDAAILVVDKPTLLLSVPGRADDNKDCLITRLQENGYPEAR---IVHRLDWETSG 62

Query: 399 LLLVAKTKEVHQHLQEQFISRSIKKRYVALLDRNGLNQQLEETGTINLPLCLNPLDRPRQ 458
           ++L+A+  + H+ L  QF  R  +K Y AL       Q   ++G+I+LPL  +P  +PR 
Sbjct: 63  IILLARDPDTHRELSRQFHDRETEKAYTALC----WGQPALDSGSIDLPLRYDPPTKPRH 118

Query: 459 MVSEEYGKPAVTEYRILNYSDKYIRIAFYPLTGRTHQLRVHAAHHQGLNYPILGDELYGK 518
           +V  E+GK A+T +R+L     + R+   P+TGR+HQLRVH      + +P+LGD LY  
Sbjct: 119 VVDHEHGKHALTFWRVLERCGDWCRVELTPITGRSHQLRVHML---CIGHPLLGDGLYAH 175

Query: 519 KA-----DRLYLHAEYIEFRHPVYGDIICIQKEAEF 549
                   RL LHA  + F HP  G+ +  +  A F
Sbjct: 176 PQALAAWPRLCLHASMLSFTHPQSGERLRFECPAPF 211