Pairwise Alignments

Query, 599 a.a., putative surface layer protein, with cytochrome c domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 340 a.a., conserved hypothetical protein containing WD40/YVTN repeat domain from Pseudomonas putida KT2440

 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 51/249 (20%), Positives = 97/249 (38%), Gaps = 30/249 (12%)

Query: 36  SGKSLFVTNRAGNELIKMSSDGQKAEQKVTLSSPVNAMTQDPSGNLWVVCDGNTGMMYEL 95
           +G   FVT+ A N +     + +     +      + +   P G    + +  +  +  +
Sbjct: 122 TGLRAFVTDSAANRVRIFDLEQRIELPGIPTGRYPHGLRLSPDGRTLYIANMKSDSVSLI 181

Query: 96  DGKKLSVQSKTKSGATPSDILYSPVSKSLWVTQRFNNELWEIDPATRKVKTKIAVGREPV 155
           D   L   ++   G  P  + ++P  +  +V+    N+L  ID A RKV  K+ VGR P+
Sbjct: 182 DVVTLKETAQIPVGKGPVQVGFAPDGRLAFVSLSATNQLGIIDTARRKVIGKVDVGRTPI 241

Query: 156 AMAPFAGDSCLLIANNLPEMSSTAYPIAVQLDIVDVPSKKVTGRIMLPNGATDAKSVAVD 215
            M        + +AN       +      ++ IVD+ ++   G +    G   A  VA+ 
Sbjct: 242 QMMATVDGRQVYVAN-----QGSGQNPDDRVSIVDIQTRSSLGTVTTGKG---AHGVAIS 293

Query: 216 KNQTYAYVTHLIARYQLPTNQLDRGWMATNTLSIIDLKAGKLLTSVLLDTPQKGAANPWS 275
            +  Y +V+++ A                 T+S+ID  + K++ +       K  A P  
Sbjct: 294 SDGAYVFVSNIEA----------------GTVSVIDTSSRKVVAT------HKVGAGPNG 331

Query: 276 VIVTPDDKQ 284
           +   P   Q
Sbjct: 332 ISFEPPSAQ 340