Pairwise Alignments

Query, 353 a.a., DNA damage-inducible protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 354 a.a., DNA polymerase IV from Pseudomonas putida KT2440

 Score =  252 bits (644), Expect = 9e-72
 Identities = 145/331 (43%), Positives = 205/331 (61%), Gaps = 10/331 (3%)

Query: 2   DAFYASVEQRDHPELRGKPLAVGHA-EERGVVAAASYEARRYGVRSAMSSQKAKRLCPQL 60
           D FYA++E RD P L G+P+AVG + + RGV+A  +YEAR YGVRSAMSS+ A +LCP L
Sbjct: 12  DCFYAAIEMRDDPRLAGRPMAVGGSPDHRGVIATCNYEARAYGVRSAMSSRHALKLCPDL 71

Query: 61  IFVSGRMDVYKSVSRQIHEIFHEYTDIIEPLSLDEAFLDVTENKKGISLAVDIAKEIKLR 120
           + V  R + Y+  SR+IH IF +YT++IEPLSLDEA+LDV++++     A  IA++I+ R
Sbjct: 72  LIVKPRFEAYREASREIHTIFRDYTELIEPLSLDEAYLDVSDSQWYSGSATRIAEDIRRR 131

Query: 121 IREQLNLVASAGVSYNKFLAKIASDYRKPDGLCTIHPDQALDFIAGLPIESFWGVGPVTA 180
           +   L++  SAGV+ NKFLAKIASD+RKP+GL  I P++   F+A LP+    GVG VTA
Sbjct: 132 VARTLHITVSAGVAPNKFLAKIASDWRKPNGLFVITPNEVETFVAALPVARLHGVGKVTA 191

Query: 181 KKMHLLGIHNGLQLRKCSLEMLTAHFGKVGALYYECSRGIDERPVEAVRIRKSIGCERTL 240
            K+  LGI   L LR+ S   L   FG  G   +  +RGIDER V     R+S+  E T 
Sbjct: 192 DKLTRLGIETCLHLREWSRLALVREFGSFGERLWGLARGIDERAVHNDSRRQSVSVENTY 251

Query: 241 ERDISVHSSVIIELYHVAVELIERLQRKE--FKGNTLTLKIKFHDFSQITRSITQSQELY 298
           + D+   +S +  L  +   L ER+ R +  ++ +   +K+KFHDFSQ T       E  
Sbjct: 252 DTDLPDLASCLARLPELLDSLNERIARMDSSYRPDKPFVKVKFHDFSQTT------MEQA 305

Query: 299 TLDRILPLAKELL-KSVEYEQHPIRLIGLSV 328
              R L   ++LL ++      P+RL+G+ V
Sbjct: 306 GAGRDLESYRQLLGQAFARGGKPVRLLGVGV 336