Pairwise Alignments

Query, 431 a.a., putative outer membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 401 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  142 bits (359), Expect = 1e-38
 Identities = 114/409 (27%), Positives = 180/409 (44%), Gaps = 37/409 (9%)

Query: 22  AQNNTNSPYTRYGYGDLSDQSFGNSKAMGGIAFGLRDGAQINPTNPASYTAIDSLTFLFE 81
           AQN T+SP + +G G+LS    G    +GG+   LR    IN  NPAS T +    F F+
Sbjct: 20  AQNMTSSPVSMFGLGELSTGEGGIYSGLGGVGIALRGENVINSANPASLTGLLPQYFFFD 79

Query: 82  GGVSLQNMNISGGGLKLNAKNASFDYLAMQFRLAPWMAMSVGLLPYSNVGYTVSDSQTT- 140
            GVS   +  S  G   ++ N + + LA+ FR+AP    ++ + P S+VGY +S  Q   
Sbjct: 80  LGVSGSYLKYSQSGASNHSLNGNLNNLAVGFRIAPRWYGAIFMAPVSSVGYAISLDQDVA 139

Query: 141 -DNGLAYSRSFTGDGGLHQMYVGAGVKVLKNLSVGVNASYFWGDITRTRGMFYPGTSSYD 199
             +G   +  F G+GGL +M +    ++ K LS+G N SY  G I++T       T S  
Sbjct: 140 GTDGSTVTSLFQGEGGLSKMGISVAHELWKGLSLGANFSYVGGSISQTETQ-GSATESNS 198

Query: 200 SYQRKMVTSISDYKLDFGAQYTQALNKKSSLTIGAVYSPKHKLNNDYTSIVIMGASSSSY 259
           S++  +         DFG QYT  L+   S   G VY     L  D   +V   +SS S 
Sbjct: 199 SHKHTIYA-------DFGLQYTYKLDHYRSAVAGVVYGYSQDLMQDNDHVVSSSSSSGSI 251

Query: 260 ---GTEYKDVLDATFELPNTFGVGFTYNYDKRLTVGADYSLQQWSKTNFGVVTSDENVRQ 316
              G +Y+        LP   G G +Y    R     DY    WS+             +
Sbjct: 252 EEKGKKYRTC------LPQFIGFGASYT-TLRWMASIDYKFVDWSRL------------E 292

Query: 317 DFNETFTYCDRTKISVGAEYIPNLIGRSYFAHIKYRLGAYYTTPYYKIDGKKASREYGVT 376
             + + ++ ++ ++ +G  Y    +G  Y   ++  LGA     Y  +  K  +  Y ++
Sbjct: 293 SSHSSISFRNQHRLMLGGSY---TLGNPYSKPVRLLLGAGMGNSYISVHDKTTTNYY-LS 348

Query: 377 AGFGLPVPRSRSILSISGQFVRVKGLETNMVNENIFRVSIGLTFNERWF 425
            G      RSRS LS+  ++     + +    E      + LTF+E+ +
Sbjct: 349 TGLNFEF-RSRSTLSLGVKYTDQLKVNSGRFKEQKLSFFLNLTFSEKTY 396