Pairwise Alignments

Query, 1605 a.a., conserved hypothetical protein, putative DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1548 a.a., Putative DNA helicase from Variovorax sp. SCN45

 Score = 88.6 bits (218), Expect = 5e-21
 Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 32/296 (10%)

Query: 1300 PCMLMSPISVAQYIDTDADKFDLIVFDEASQMPTYEAVGAIARGKNVVIVGDPKQMPPT- 1358
            PC +MS   V++ +      FDL++ DEASQ   + A+ A+ RGK +++VGD KQ+ P  
Sbjct: 1076 PCWVMSHSKVSETLPAHLGAFDLVIVDEASQSDLW-ALPAVLRGKKILVVGDDKQVSPDG 1134

Query: 1359 SFFSVNTIDE--DNIEMED--------LESILDDCLALSIPSKYLLWHYRSKHESLIAFS 1408
             F S   I E  D    E           S+ D   A+   +K +L  +      +I +S
Sbjct: 1135 GFISSVRIQELRDRFLSEQPYAAVLTPEMSLYDIASAVFASNKVMLREHFRCVPPIIGYS 1194

Query: 1409 NSEYYDNKLMTFPSP---DNIESKVRMVAVDGYYDKGKSRQNQAEAQAVVDEIARRLRSE 1465
            N+ +YD+++     P   + I+  +  + V G   +G   +N  EA+ +V+EIA  + + 
Sbjct: 1195 NT-FYDHQIQPLRIPKASERIDPPLVDIFVPG-GTRGAKAENMMEAECIVEEIAAIVANP 1252

Query: 1466 ELRKKSVGVVTFSVVQQALIEDLLSDLFIFHPELETFALECEEPLFIKNLENVQGDERDV 1525
            +L  +++GVV+   ++QA   D +    +   EL            + +    QG ERD+
Sbjct: 1253 QLVGRTIGVVSMLGLEQAKRIDSMVRQRMDAKEL------MRRKFDVGDARLFQGSERDI 1306

Query: 1526 ILFSVGYGPDAEGRVSMNFGPLNRAGGERRLNVAVSRARYEMIIFSTLRSDMIDLN 1581
            +  S+  G +    VS N         E+R NVA SRAR  M +  +++  M DL+
Sbjct: 1307 MFLSMVVGQEGAKAVSGN-------AFEQRFNVAASRARDRMYLVRSVQ--MADLS 1353



 Score = 45.8 bits (107), Expect = 4e-08
 Identities = 21/70 (30%), Positives = 40/70 (57%)

Query: 661 DIVLPIIADSSQLEAIYEAVHDKTFILHGPPGTGKSQTITNIIANALYKGKRVLFVAEKM 720
           ++  P+  +  Q+  + +        + GPPGTGK+ TI NI+ + L  G++VL  ++  
Sbjct: 387 ELFFPLPYNHEQVTIVEQLERAAGVTVQGPPGTGKTHTIANIVCHYLATGRKVLVTSKGE 446

Query: 721 AALSVVQNRL 730
            AL V+Q+++
Sbjct: 447 QALEVLQSKI 456