Pairwise Alignments

Query, 1605 a.a., conserved hypothetical protein, putative DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 722 a.a., helicase from Escherichia coli ECRC99

 Score = 65.9 bits (159), Expect = 2e-14
 Identities = 107/477 (22%), Positives = 187/477 (39%), Gaps = 67/477 (14%)

Query: 1145 ALQQAATWKENLDKLKDWYQWLQSYNKLNELGIGFIAEEYK-EKNIPTDLLTSSFC---- 1199
            A+ Q A+ K  +++L   Y++LQ +   N       + +Y+      TDL+         
Sbjct: 124  AINQVASLKAEINELNIEYKYLQQWQSQNLRPEELFSHKYRFSSQKTTDLMAYIHYLSDR 183

Query: 1200 ----KSFYQAVIHYIIAKEPTLELFNGKI--FNDIIAKY-------KQVSAN-FEDITKK 1245
                ++    +++++I K   L +   ++  F  +   Y       KQ+S N +E+  KK
Sbjct: 184  RIGFRNRIDLLLNFMILKVKPLMIPERRLALFTSLQLSYYEKNIREKQISLNEYEEAFKK 243

Query: 1246 ELFARLASNIPSFTHEAIQSSEVGILQKNIRNNARGISIRKLFDQIPTLLSRMCPCMLMS 1305
              F  L   + S++   ++      L++N+   +   S     D+    + R  P +  S
Sbjct: 244  SDFKILLGRLTSWSMLYLKQH----LRRNVSTRS-SFSAETYRDEFDRFIKRF-PIIGSS 297

Query: 1306 PISVAQYIDTDADKFDLIVFDEASQMPTYEAVGAIARGKNVVIVGDPKQMPPTSFFSVNT 1365
              S+   I   A   D ++ DEASQ      +  +   +NV++VGD KQ+P       N+
Sbjct: 298  THSIINSIGKGA-LLDYVIIDEASQQDIVPGILGLGCARNVIVVGDRKQLPHVPVLLPNS 356

Query: 1366 IDEDNIEMEDLE--SILDDCLAL---SIPSKYLLWHYRSKHESLIAFSNSEYYDNKLMTF 1420
                  E  + E  S+LD    L    +P   L  HYR  H  +I F N ++YDN L+  
Sbjct: 357  -PSPPAEYYNCEKYSLLDSVCMLFRNMVPVTLLKEHYRC-HPKIIQFCNKQFYDNALIPL 414

Query: 1421 PSPDNIESKVRMVAVDGYYDKGKSRQNQAEAQAVVDEIARRLRSEELRKKSVGVVTFSVV 1480
                   S   ++   G + +  S   + E+      +      EE    S G +     
Sbjct: 415  TVDSGEASLSLVITAKGNHTRNFSNLRELES------LEGHYWDEE---SSRGYIAPYNA 465

Query: 1481 QQALIEDLLSDLFIFHPELETFALECEEPLFIKNLENVQGDERDVILFSVGYGPDAEGRV 1540
            Q  L E +L   F+                    +   QG E D I+FS         + 
Sbjct: 466  QVNLAEKVLPADFV-----------------KSTVHKFQGRECDEIVFSTVLDKKRSSQH 508

Query: 1541 SMNFGPLNRAGGERRLNVAVSRARYEMIIFSTLRSDMIDLNRTSSIGVAGLKRFLEY 1597
            S N   ++       +NVAVSRAR +  + +       D+    +  +A L R+++Y
Sbjct: 509  SRNIAFVD---NPELVNVAVSRARNKFTLVTG-----NDVFERHAGHIAALIRYIKY 557



 Score = 60.1 bits (144), Expect = 9e-13
 Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 6/149 (4%)

Query: 662 IVLPIIADSSQLEAIYEAVHDKTFILHGPPGTGKSQTITNIIANALYKGKRVLFVAEKMA 721
           ++ P   + SQL A+  A   +  ++ GPPGTGK+QTI NI+AN L + K V  ++   +
Sbjct: 1   LIFPFGLNESQLLAVERAFSSQISVIEGPPGTGKTQTILNIVANILIQNKTVAILSNNNS 60

Query: 722 ALSVVQNRLAAIGLAPFCLEIHSNKTKKSTVISQLKETTEIIRRTPPEEFKKEAERLLKL 781
           A+S V  ++    L      + S + ++    + +  + E++  +P       A  +  +
Sbjct: 61  AVSNVYEKMDKQQLGYVMARLGSTENRQQFFSTSISRSEEVLPDSP------SANAIDDV 114

Query: 782 RTELNKYIEALHKEYPFGLSLYDAIIHYQ 810
             ++ K++ A+++       + +  I Y+
Sbjct: 115 LQQVKKHLNAINQVASLKAEINELNIEYK 143