Pairwise Alignments

Query, 1605 a.a., conserved hypothetical protein, putative DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 397 a.a., hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 53.1 bits (126), Expect = 6e-11
 Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 17/187 (9%)

Query: 135 AAFITPNHAVLTPIIKRA--AAILEQWTGTPSLDEYQSRNPDRVRKQMAAIYTALTEQQI 192
           AA++   + ++  +++ A    I+ ++ G      YQS     V KQ+ A++  L +++ 
Sbjct: 188 AAYVNEENPMIDQLLREALNTRIVNRFLG------YQSTAKGAVDKQVYALWNILQKRKF 241

Query: 193 IYSTIP----ASFEEHGQRVRLTDSVLAQKLGTCLDMALLYASCLESIGLNALIVITKGH 248
            YS++     +S     QRVR  D  L      C+D ++L+AS L +I +  ++V T GH
Sbjct: 242 RYSSVSNTSLSSNVVFSQRVRTFDDALESSQINCVDGSVLFASLLRAINIEPILVRTPGH 301

Query: 249 AFAGGWLVPETFPDPAIDDVSLLTKRTAEGIYDITLVETTCMNMGHN----ADFDNAVKS 304
            F  G+    +  D    + +++     +  +    +++T +    N      F+ + + 
Sbjct: 302 MFV-GYYTDNSHKDMNFLETTMIGDVDLDDFFPDEQLDSTMVGKSQNEMSLLTFEKSKQY 360

Query: 305 ANGKLSD 311
           AN K  D
Sbjct: 361 ANKKYKD 367