Pairwise Alignments

Query, 352 a.a., exo-poly-alpha-D-galacturonosidase precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 439 a.a., Endopolygalacturonase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  140 bits (353), Expect = 6e-38
 Identities = 87/280 (31%), Positives = 143/280 (51%), Gaps = 9/280 (3%)

Query: 63  FGAVADSTVLSTEAIQKAIDSCAVSGGGTVVLQPGYYQTGALFVKSGVNLQIGKGVTLLA 122
           +G V DSTVL TE IQ  ID  +  GGG +++  G + +G+LF K G +L + K   +  
Sbjct: 55  YGVVNDSTVLQTEKIQAVIDQASEQGGGIIIIPAGTFLSGSLFFKPGTHLHLEKNAVIKG 114

Query: 123 SPDIHHYPEFRSRIAGIEMTWPAAVINIVDEKNAAISGEGTLDCRGKVFWDKYWEMRKEY 182
           S DI H+    +R+ G  + + AA++N        ISG GTL+  G  +W  +W +R+++
Sbjct: 115 SDDITHFKLLETRMEGQTLKYFAALVNADGMDGFTISGSGTLNGNGHRYWRHFW-IRRQF 173

Query: 183 EARGLRWIVDYDCKRVRGILVERSSDITLSGFTLMRTGFWGCQILYSDYCTIDGLTI-NN 241
                    + D  R R + +  S ++ +SG +L+ + FW       +   I  L I   
Sbjct: 174 NKN----CTNMDEMRPRVLYISNSKNVQVSGISLINSPFWTSHYYKCENVKILNLHIFAP 229

Query: 242 NIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGR--DADGLRVNRPTENVVVRN 299
           +     PS+D ID+D+  N+L++NC +  NDD I +K G+  +AD    N    N++V +
Sbjct: 230 HTTEKAPSSDAIDLDACKNVLVKNCFMSVNDDAIALKGGKGPNADTDPNNGGNYNIIVED 289

Query: 300 CTARKGAGLITCGSETSGSIRNVLGYDLKAVGTYTVLRLK 339
           C        +TCGSE+  + RN++   +K      +  LK
Sbjct: 290 CEFGFCHSALTCGSESIHN-RNIILRRIKVTDAKRLFLLK 328