Pairwise Alignments

Query, 352 a.a., exo-poly-alpha-D-galacturonosidase precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 455 a.a., Endopolygalacturonase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  136 bits (342), Expect = 1e-36
 Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 23/277 (8%)

Query: 63  FGAVADSTVLSTEAIQKAIDSCAVSGGGTVVLQPGYYQTGALFVKSGVNLQIGKGVTLLA 122
           FGA  D    +++AI  AI +   +GGG +V+  G + TG + +KS +N+ + +G TLL 
Sbjct: 57  FGAEEDDQQATSQAIVTAISAAVEAGGGRIVIPAGEWPTGKIHLKSNINIHLEEGATLLF 116

Query: 123 SPDIHHY-PEFRSRIAGIEMTWPAAVINIVDEKNAAISGEGTLDCRGKVFWDKYWEMRKE 181
           S D   Y P  ++   G+E    + +I   D +N AI+G+G L  +   +  K W  R +
Sbjct: 117 SEDPKDYLPAVKTTWEGMECFNYSPLIYAFDCENIAITGKGELKAKMNTW--KVWFSRPK 174

Query: 182 YEARGLR----------------WIVDYDCKRVRGILVERSSDITLSGFTLMRTGFWGCQ 225
                L+                ++ D    R + I   R   + L G  +  + FW   
Sbjct: 175 AHMESLKRLYNLAATDVPVEERNFVNDSSNFRPQFIQFNRCEKVLLEGVKITNSPFW--- 231

Query: 226 ILYSDYCTIDGLTINNNIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADG 285
            +   + + D +  +  +  HG + DG+D + S N+LIENC  D  DD I +KSGR+ D 
Sbjct: 232 -VIHPFMSKDVVIRDVQVFAHGHNNDGVDPEMSQNMLIENCIFDQGDDAIAVKSGRNQDA 290

Query: 286 LRVNRPTENVVVRNCTARKGAGLITCGSETSGSIRNV 322
            R+N PT+N+V+RN   + G  L+  GSE SG + NV
Sbjct: 291 WRLNMPTKNIVIRNSLVKNGHQLLAIGSELSGGVENV 327