Pairwise Alignments

Query, 665 a.a., putative helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 531 a.a., PIF1 helicase. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  370 bits (949), Expect = e-106
 Identities = 218/512 (42%), Positives = 320/512 (62%), Gaps = 24/512 (4%)

Query: 3   VDTNNAAFQDALNLIQYTRQSVFLTGKAGTGKSTFLRYVCEHTKKKHV-VLAPTGIAAIN 61
           +DT+N AF  AL +  ++ +S+FLTGKAGTGK+TFL  + +  + K++ V+APTG+AAIN
Sbjct: 18  LDTDNEAFIHALEVALFSDKSLFLTGKAGTGKTTFLHTLRKLNQDKNMAVVAPTGVAAIN 77

Query: 62  AGGSTMHSFFKL-PFYPLLPDDPNLS---LQRGR---IHEFFKYTKPHRKLLEQIELVII 114
           A G T+HSFFK+ P    LP DP L     ++G+   I E F+Y K HR L+ ++++++I
Sbjct: 78  AKGKTIHSFFKIDPRQLFLPGDPRLQPKKREKGKGLNIFEQFQYRKKHRDLINRMDMLVI 137

Query: 115 DEISMVRADLIDAIDRILRVYSHNLREPFGGKQLLLVGDVFQLEPVVKNDEREILNRAYP 174
           DE+SMVR +L+D ID++LRVY   +  PFGG Q++ +GD FQL PVV+N + E L   Y 
Sbjct: 138 DEVSMVRVELLDVIDQLLRVYRKKMHLPFGGVQMIFIGDPFQLPPVVRNTDWEHLAPHYG 197

Query: 175 TPYFFSARVFSQIDLVSIELQKVYRQTDSVFVSVLDHIRTNTAGAADLQLLNT-----RY 229
           + +FFS+  F  +  + IELQK+YRQ D  F ++L+ IR +    AD+Q LN      R+
Sbjct: 198 SRFFFSSHAFQALMPLHIELQKIYRQKDEQFKALLNRIRESEHTPADIQRLNETAKNYRF 257

Query: 230 GSHIEESEADMYITLATRRDTVDSINEKKLAELAGEPITFEGSIEGDFPESSLPTSQ-EL 288
           G   EE     YI + T   T+  IN +KLAEL  EP T+   I+ DFP +  P    +L
Sbjct: 258 GLLDEE-----YILIGTHNATIAEINRQKLAELKKEPRTYRAEIKDDFPLNMAPFDPVDL 312

Query: 289 VLKPGAQIIFIKNDFDRRWVNGTIGVIAGIDEEEETIYVITDDGKECDVKRESWRNIRYR 348
            LK GAQ+IF++N+ D ++ NG IG +  +   ++ I V    G   +V RE W N+ + 
Sbjct: 313 TLKIGAQVIFMRNNPDAKYYNGMIGKVTKM--TDDMIEVEDRRGFIYEVHREVWENVEFV 370

Query: 349 YNEKTKEIEEEVLGSFTQYPIRLAWAITVHKSQGLTFSRVVIDFTGGVFAGGQAYVALSR 408
           YNE  + +E +V+G+F Q+P++LAWAITVHKSQGLTF R ++D +   F  GQAYVALSR
Sbjct: 371 YNEAEEHLESKVIGTFIQFPLKLAWAITVHKSQGLTFERAILDISRS-FEAGQAYVALSR 429

Query: 409 CTSLDGIQLKKPINRADIFVRPEIVNFAGRFNDRQAIDKALKQAQADVQYAAAARAFDKG 468
           CT+L+G+ LK PI    + V PE + F+ +    + I+K L+ A+A      A RAF  G
Sbjct: 430 CTTLNGLVLKSPIREFSVKVSPESLAFSRQRLASEQIEKELELARALQLLKHAFRAFRNG 489

Query: 469 DMEECLEQFFRAIHSRYDI-EKPVPRRLIRRK 499
             E   +Q F  + + +D+ + P  ++ +R K
Sbjct: 490 QYETA-QQMFDEVMAIHDVTQYPKWQQFLRLK 520