Pairwise Alignments

Query, 665 a.a., putative helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 231 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 51.6 bits (122), Expect = 4e-11
 Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 4/176 (2%)

Query: 465 FDKGDMEECLEQFFRAIHSRYD--IEKPVPRRLIRRKLGIINTLQEQNKKLKEQMREQQE 522
           +D G  E  LE+F  AI + +D  IE+           G+    Q +  +  +  +   E
Sbjct: 16  YDAGIKEMRLEKFNEAI-TYFDRVIEQNPDHTEAHNAKGVAFFEQGKWDEAIKHFKVAME 74

Query: 523 RLRQYAHEYLLMGNECITQAHDARAAIANYDKALSLDPNYIDAWIRKGITLFNSKEYFDA 582
           +       YL +GN  + +    + A+ NY+ A SLDPN  D +  +G+ L   + Y DA
Sbjct: 75  KDSTSYKPYLNLGNAYL-EKKAFKDAVINYNMASSLDPNQTDIYYNRGLALLGMEAYEDA 133

Query: 583 ENCFNTAVSLHPANFKAVYNRGKLRLKIDNTEGAIADLDKATSLKPEHAGAHELFG 638
              F+ A+ + P      +NR K  +  +N   AI  L ++ ++   +  A  L G
Sbjct: 134 ILDFDNALQVDPNQALVHFNRAKALIGNNNPLEAINALKRSVAIDNTNGAAFYLLG 189



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 11/122 (9%)

Query: 540 TQAHDARA-----------AIANYDKALSLDPNYIDAWIRKGITLFNSKEYFDAENCFNT 588
           T+AH+A+            AI ++  A+  D      ++  G      K + DA   +N 
Sbjct: 46  TEAHNAKGVAFFEQGKWDEAIKHFKVAMEKDSTSYKPYLNLGNAYLEKKAFKDAVINYNM 105

Query: 589 AVSLHPANFKAVYNRGKLRLKIDNTEGAIADLDKATSLKPEHAGAHELFGDALLRVGKEV 648
           A SL P      YNRG   L ++  E AI D D A  + P  A  H     AL+     +
Sbjct: 106 ASSLDPNQTDIYYNRGLALLGMEAYEDAILDFDNALQVDPNQALVHFNRAKALIGNNNPL 165

Query: 649 EA 650
           EA
Sbjct: 166 EA 167



 Score = 40.4 bits (93), Expect = 9e-08
 Identities = 24/95 (25%), Positives = 45/95 (47%)

Query: 548 AIANYDKALSLDPNYIDAWIRKGITLFNSKEYFDAENCFNTAVSLHPANFKAVYNRGKLR 607
           AI  +D+ +  +P++ +A   KG+  F   ++ +A   F  A+     ++K   N G   
Sbjct: 31  AITYFDRVIEQNPDHTEAHNAKGVAFFEQGKWDEAIKHFKVAMEKDSTSYKPYLNLGNAY 90

Query: 608 LKIDNTEGAIADLDKATSLKPEHAGAHELFGDALL 642
           L+    + A+ + + A+SL P     +   G ALL
Sbjct: 91  LEKKAFKDAVINYNMASSLDPNQTDIYYNRGLALL 125



 Score = 33.1 bits (74), Expect = 1e-05
 Identities = 17/60 (28%), Positives = 28/60 (46%)

Query: 600 VYNRGKLRLKIDNTEGAIADLDKATSLKPEHAGAHELFGDALLRVGKEVEAAIQWRIAEE 659
           +Y+ G   ++++    AI   D+     P+H  AH   G A    GK  EA   +++A E
Sbjct: 15  LYDAGIKEMRLEKFNEAITYFDRVIEQNPDHTEAHNAKGVAFFEQGKWDEAIKHFKVAME 74