Pairwise Alignments
Query, 1450 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Subject, 1219 a.a., Signal transduction histidine kinase from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 478 bits (1230), Expect = e-138
Identities = 365/1249 (29%), Positives = 593/1249 (47%), Gaps = 166/1249 (13%)
Query: 295 PSNVVQSVYQDHYKELWIFPQTTGVIRYNP----------------STKEMQHLFTPADE 338
P N V S+ +D Y +W F G +RY+ S + + T + +
Sbjct: 42 PQNSVYSIAKDKYGFMW-FGTWGGAVRYDGYNVQVFRANEKDSTALSDNRISGIVTDSLQ 100
Query: 339 VIRYERKNKNVIFE-DRQHTLWVLPPEGNLSYYDRE------------------------ 373
I E + +F+ D Q + P EG + Y RE
Sbjct: 101 NIWIEVEPHGALFQFDYQTESFHRPREGQVPDYLREKLLKRYSYHTKYASNQQYEWQTSD 160
Query: 374 ------NKELKPML---KDSNNPKSVFSPLVRFYTLDNQGNCWL-TSTRGIYKLSFFPHT 423
NK L D+ NP S+ LV+ LD+ G+ W+ T + G+ +
Sbjct: 161 YGLVQINKTTHDTLIYHADARNPMSLSDHLVKDVYLDDNGHLWVGTQSGGVDHADLYDKA 220
Query: 424 YNLVH--------IDNGFETRAFLCDNEKRLWVSSKAQMIRVYQPDGQLEGYLTPQGKIS 475
+ + IDN RA D RLW+ S+ Q I + D Y GK
Sbjct: 221 FKNYYKGRRGEGLIDN--VARAICMDQSGRLWIGSENQGITILSFDHATPSYSYIGGKNL 278
Query: 476 KDKQSFTSVYCFLEDHEGNIWIGTKENGIYLLKKKSPDSYSVQQFTHQPNMPYSLSGNSV 535
D + T ++C D +G +WIGTK+ Y KK Q+FT + + SV
Sbjct: 279 PDLRIRT-LFC---DTKGRVWIGTKKGLFYFDPKK-------QEFT---SCTMDMCHPSV 324
Query: 536 YSIFQDSHKRIWIGCYGGGINLLTYNKDGKTEFIH--------SDNELKNYPTGYASKVR 587
+SI +D + IW+G + G L +Y D +T+ H + N++ + + ++
Sbjct: 325 FSITEDHNGTIWVGTFYG---LASY--DPQTDKFHCLSTTNGLAGNQIMDLLMDHKGQLW 379
Query: 588 HISEAPGGVLLIGTTNGLLTFSNQFERPEEIKFYRNCCESGISTSLSGNDVMHTYTDKQK 647
+E G I + +SN+ ++I YR+ S L N V D
Sbjct: 380 AATEDGG----ISCIKNPVPYSNE----QDITNYRH--NSAPGNRLLSNRVFSLAEDHLG 429
Query: 648 RTYIASFTGGISQIVSKNLLSNKIEFKTYTTDDGLASDLVQAMQEDQQGNLWILSENAIS 707
+ AS G + ++ + Y+T +GL DL A+ D ++W +S
Sbjct: 430 HIWAASDAG------LNCIYPDQQSIQHYSTSNGLIDDLTMAVAFDGSHSIWTSHTKGLS 483
Query: 708 KFDAQRKTFENYGLNSLHQEFSFSEAAPVINARN-QIVFGTDKGFIEISSKEMQKSSYVP 766
+ D +++ Q F ++A N + ++ FG G +++ + P
Sbjct: 484 RLDLATNKIQHFNRKDGLQGNEFKQSAVFRNPTDHRLYFGGSNGMTTFIPSQIKTNPNPP 543
Query: 767 PIVFTGLKVQGQSSVI------------AIDDLEELRLTPSQRNVTFQFAALDYVDSKEI 814
+ T L V Q I ++ E + LT +++ +FAA+ + +
Sbjct: 544 NMALTRLSVMHQELNIGTKVRDRVILKSSLLTTEAITLTWWEKSFQVEFAAIHFTNPLSN 603
Query: 815 RYAYRLKGLEEEWHDGDKNRS-ASYINLPNGKYKLQIKSTNSDGVWMDNIRTLSINVLPT 873
+Y Y+L+G +E W D R ASY NLP G+Y ++ NSDGVW ++ L I VL
Sbjct: 604 KYQYKLEGYDEAWITTDATRRIASYANLPPGEYTFKVLGANSDGVWSESPAMLKIIVLTP 663
Query: 874 FWETGWAWLLYVILFVLFTGSIVYVLFYIYRLRHQVDIEQQLSNIKLRFFTDISHELRTP 933
+W + WA V + + +V++++ + Q+ ++ + + KL+FFT+ISHE RTP
Sbjct: 664 WWLSWWA----VCFYFMVVACVVWLVYRYLDSKIQLRKKEAIHHSKLQFFTEISHEFRTP 719
Query: 934 LTLISSPVNEVLENEDLSATAREHLTVVQKNAERMLRLMNQILDFRKIQNQKMKVLVEKT 993
LTLI P++ ++ + A + +++ NA+++L L+NQ+LDFRK++ K+++ ++
Sbjct: 720 LTLIIDPLDRLIHEKPKKQLAEHYYHLMRNNAQQLLMLINQLLDFRKLEAGKLRLNLQSI 779
Query: 994 DLIPLLEKVMINFRLIAEEKKINFRLASELKSIYAWIDRDKFEKIFFNLISNAFKYTPAE 1053
D++P ++K + +F +AE+K I + + L S ID DK + NL+SNA K+TP++
Sbjct: 780 DIVPFVKKTVASFEHLAEKKDIALGVETTLSSYPIRIDEDKITMVLNNLLSNALKFTPSQ 839
Query: 1054 KAITIEVTKQTDK---VTISVVDEGIGIEPTKLRTLFQRFETLAQQNMLQPSSGIGLSLV 1110
+ + + + V I V D G GI + +F F + SGIGL+L
Sbjct: 840 GKVQVSLRPEEGTAKGVYIEVKDSGPGIPKAEQENVFGIFYQVKNGKARSEGSGIGLALT 899
Query: 1111 KEMVDMHHGTIKVTSEPEAGSRFIVTLPLQKEVFEQDSQVEFILNDSQSPTTHPDSSLQT 1170
KE+V +H G I + S G+ LP + S +P + S +T
Sbjct: 900 KELVVLHGGEISIESSLGKGTTLGFFLP----------------DTSSAPQSSRKS--KT 941
Query: 1171 EKRAEAEDKEDMENNT----AP-DTLTILVVEDNEELKAFLKNILSENYTVITASNGKEG 1225
+ A + +ME+ T AP D +L+V+DNEE+K+++K L YT+ITA+NG+EG
Sbjct: 942 PEEASSPVSAEMESFTIDQPAPGDAPLLLLVDDNEEIKSYIKMHLQGQYTIITAANGREG 1001
Query: 1226 LQHAVDNIPDLIISDVMMPVMDGLEMIRQIKENNNICHIPIIVLSAKASLDDRIAGLEQG 1285
+ A DNIPDLIISDVMMP M GL++ +Q+K + HIPII+L+AK S + + G G
Sbjct: 1002 VAKAFDNIPDLIISDVMMPDMHGLQLCQQLKTDMRTSHIPIILLTAKQSDEAKSEGYGTG 1061
Query: 1286 IDDYITKPFSATYLKTRIASLLRQRKSLQEIYMAKLTEGKEIAVAEALTPSQPQIT--PY 1343
D Y+TKPFS LK RI +LL QR+ LQ + A A P T P
Sbjct: 1062 ADSYVTKPFSTQVLKARIKNLLDQRQHLQ------------VKFASASPEELPSCTANPV 1109
Query: 1344 DEQFMQKVMEFIEEQMDNAELTIDEFAEHLMLSRTIFYRKLKSIIGLTPVDFIREVRIKR 1403
D+ F++ E+IE +++ +L +D A+ L +SR FYRK+K + + +FI R+++
Sbjct: 1110 DKAFLENAREYIEHNLESEDLDVDSLAKKLNMSRPQFYRKIKGLTDKSAAEFITSFRMEK 1169
Query: 1404 AAQLIDSGEYNFSQVAYMTGFNDPKYFSKCFKKVVGITPSEY---KEKN 1449
A++L+ SGE+N S+ AY G+N P FS+ F K G++PS+Y K KN
Sbjct: 1170 ASKLLRSGEFNVSETAYKVGYNLPNNFSRAFIKHFGVSPSQYIKGKRKN 1218
Score = 84.3 bits (207), Expect = 7e-20
Identities = 108/470 (22%), Positives = 191/470 (40%), Gaps = 61/470 (12%)
Query: 29 SVNDGMSQGIVQTIIQDKKGFLWFGTWNGLNKFDGYTFKNYKTSYKDGYILNTNRISQIA 88
+V++G+ Q V +I +DK GF+WFGTW G ++DGY + ++ + KD L+ NRIS I
Sbjct: 36 TVDNGLPQNSVYSIAKDKYGFMWFGTWGGAVRYDGYNVQVFRANEKDSTALSDNRISGIV 95
Query: 89 ETKYGDIWCQAY-DGRVYMFDNQTEKF-IDILGSVAETM---ITNNYADHI-YTLSKGIS 142
+IW + G ++ FD QTE F G V + + + Y+ H Y ++
Sbjct: 96 TDSLQNIWIEVEPHGALFQFDYQTESFHRPREGQVPDYLREKLLKRYSYHTKYASNQQYE 155
Query: 143 WITFQNECAAIRIDDQLCKQGKGITLYSSFKQN---LKGDKIYTVFEDSEGDEWILTNKG 199
W T ++ ++I+ K +Y + +N L + V+ D G W+ T G
Sbjct: 156 WQT--SDYGLVQIN----KTTHDTLIYHADARNPMSLSDHLVKDVYLDDNGHLWVGTQSG 209
Query: 200 ISIIGKKQVDSDFPFQYI-KEADGIIYLV-----------------SQSDKLASYNFKTR 241
+ D F Y + +G+I V +Q + S++ T
Sbjct: 210 -GVDHADLYDKAFKNYYKGRRGEGLIDNVARAICMDQSGRLWIGSENQGITILSFDHATP 268
Query: 242 QFKFI---EIPYHVSMINEVKKFDSNTLLLATDNGLIIYKIKEKEFQLIDIRTSTQPSNV 298
+ +I +P I + + + T GL + K++EF + PS
Sbjct: 269 SYSYIGGKNLP--DLRIRTLFCDTKGRVWIGTKKGLFYFDPKKQEFTSCTM-DMCHPS-- 323
Query: 299 VQSVYQDHYKELWIFPQTTGVIRYNPSTKEMQHLFTPADEVIRYERKNKNVIFEDRQHTL 358
V S+ +DH +W+ G+ Y+P T + H + + + + + + D + L
Sbjct: 324 VFSITEDHNGTIWV-GTFYGLASYDPQTDKF-HCLSTTNGLAGNQIMD---LLMDHKGQL 378
Query: 359 WVLPPEGNLSY------YDRENKELKPMLKDSNNPKSVFSPLVRFYTLDNQGNCWLTSTR 412
W +G +S Y E +++ +S + S V D+ G+ W S
Sbjct: 379 WAATEDGGISCIKNPVPYSNE-QDITNYRHNSAPGNRLLSNRVFSLAEDHLGHIWAASDA 437
Query: 413 GIYKLSFFPHTYNLVH--IDNGF---ETRAFLCDNEKRLWVSSKAQMIRV 457
G+ +P ++ H NG T A D +W S + R+
Sbjct: 438 GLN--CIYPDQQSIQHYSTSNGLIDDLTMAVAFDGSHSIWTSHTKGLSRL 485
Score = 42.4 bits (98), Expect = 3e-07
Identities = 65/288 (22%), Positives = 100/288 (34%), Gaps = 68/288 (23%)
Query: 530 LSGNSVYSIFQDSHKRIWIGCYGG-----GINLLTYNKDGKTEFIHSDNELKNYPTGYAS 584
L NSVYSI +D + +W G +GG G N+ + + K SDN + T
Sbjct: 41 LPQNSVYSIAKDKYGFMWFGTWGGAVRYDGYNVQVFRANEKDSTALSDNRISGIVTDSLQ 100
Query: 585 KVRHISEAPGGVLLIGTTNGLLTFSNQFERPEE------------------IKFYRN--- 623
+ I P G L + F RP E K+ N
Sbjct: 101 NI-WIEVEPHGALFQFDYQ-----TESFHRPREGQVPDYLREKLLKRYSYHTKYASNQQY 154
Query: 624 ----------------------CCESGISTSLSGNDVMHTYTDKQKRTYIASFTGGISQI 661
++ SLS + V Y D ++ + +GG+
Sbjct: 155 EWQTSDYGLVQINKTTHDTLIYHADARNPMSLSDHLVKDVYLDDNGHLWVGTQSGGVDHA 214
Query: 662 VSKNLLSNKIEFKTY---TTDDGLASDLVQAMQEDQQGNLWILSEN---AISKFDAQRKT 715
L +K FK Y +GL ++ +A+ DQ G LWI SEN I FD +
Sbjct: 215 D----LYDK-AFKNYYKGRRGEGLIDNVARAICMDQSGRLWIGSENQGITILSFDHATPS 269
Query: 716 FENYGLNSLHQEFSFSEAAPVINARNQIVFGTDKGFIEISSKEMQKSS 763
+ G +L + + ++ GT KG K+ + +S
Sbjct: 270 YSYIGGKNLP---DLRIRTLFCDTKGRVWIGTKKGLFYFDPKKQEFTS 314
Score = 31.6 bits (70), Expect = 5e-04
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 25 IKHYSVNDGMSQGIVQTIIQDKKGFLWFGTWNGLNKFDGYTFKNYKTSYKDGYILNTNRI 84
I+HYS ++G+ + + D +W GL++ D T K + KDG L N
Sbjct: 449 IQHYSTSNGLIDDLTMAVAFDGSHSIWTSHTKGLSRLDLATNKIQHFNRKDG--LQGNEF 506
Query: 85 SQIA 88
Q A
Sbjct: 507 KQSA 510