Pairwise Alignments

Query, 559 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 374 a.a., polysaccharide lyase from Pectobacterium carotovorum WPP14

 Score = 48.1 bits (113), Expect = 6e-10
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 19/130 (14%)

Query: 163 NFG----GSENFIIRHMRFRVGEKDASGKEHNAACLRVENANNFIIDHC-----SFSWAS 213
           NFG     S N ++R+MRF  G      K+ +A  +R++N+ N  IDH      +F  A 
Sbjct: 123 NFGIWLVNSSNVVVRNMRF--GYMPGGAKDGDA--IRIDNSPNVWIDHNEIFAKNFECAG 178

Query: 214 EENTDF-----IDTHFSTVQWCISSEGLYYSVNKKGARAYGGAWGGTSSTYHHNLFAHCN 268
             + D      +D   ++    +S   ++  V K G         G + TYHHN+++  N
Sbjct: 179 TPDNDTTFESAVDIKKASTNVTVSYNYIH-GVKKVGLSGSSNTDTGRNLTYHHNIYSDVN 237

Query: 269 SRTPLMNGAR 278
           SR PL  G +
Sbjct: 238 SRLPLQRGGQ 247