Pairwise Alignments

Query, 523 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 425 a.a., pectate lyase from Pectobacterium carotovorum WPP14

 Score =  111 bits (277), Expect = 6e-29
 Identities = 87/254 (34%), Positives = 126/254 (49%), Gaps = 43/254 (16%)

Query: 54  PTPDRSTVAAFPGAEGAGKLTTGGAGGTVYTVTSLKDDGSEGTLRWAIEKSGKRTIVFAV 113
           P    +T AA P  +G G  T  G+GG +  VT+L   G+ G+LR A+   G R IVF V
Sbjct: 22  PMASAATPAA-PELKGFGTDTVAGSGGRIIRVTTLASSGA-GSLREALAAKGPRIIVFEV 79

Query: 114 GGVIPLTKQ-LQIKNDDITIAGQTAPHPGICLKNYTLRVNANNVIIRFIRSRMGDECK-- 170
           GG+I L K  L++    +TIAGQTAP PGI +    + ++ ++V+++ IR R+GD     
Sbjct: 80  GGIIDLNKSDLRLSEPFVTIAGQTAPSPGITIIRGGMGISTHDVLMQHIRFRIGDAGTGK 139

Query: 171 ----TEDDSMNGYQDSYPGKRNIIIDHCSMSWSTDECASFYGNT---------DFTMQWC 217
                 D S+NG +D+Y    N++IDH S +W TDE  S  G             T+   
Sbjct: 140 KSGFERDVSING-KDAY----NVVIDHSSFAWGTDENLSISGPRYDGPQGTAHRITLSNN 194

Query: 218 IISESLTNSLHNKGGHGYGGIWGGSPATFHHNLLAHHSNRTPRLCGSRYSNREDME---K 274
           I++E L +S H KG H  G              L H +     + GS Y++  +     K
Sbjct: 195 IVAEGLYDSAHTKGIHSMG-------------TLVHDNVTDVSIVGSLYAHNNERNAWFK 241

Query: 275 AD----LCNNVIYN 284
           A     + NN+IYN
Sbjct: 242 AGSTGVMVNNLIYN 255