Pairwise Alignments

Query, 1071 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1051 a.a., SusC/RagA family TonB-linked outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  456 bits (1172), Expect = e-132
 Identities = 336/1084 (30%), Positives = 534/1084 (49%), Gaps = 106/1084 (9%)

Query: 24   SAQTITLNGNVKDTTGEPIIGASIVEKGNTTNGTITDLDGNFSLKVP-ANATVVISYIGM 82
            +AQ +T++G V D  G  + G ++V KG TT GT TD  GNFSL VP  + T++ S+IG 
Sbjct: 38   TAQEVTVSGRVVDENGSGLPGVTVVLKG-TTKGTTTDATGNFSLPVPDGSGTLLFSFIGY 96

Query: 83   KTQEIAIKGKSKIDVTLSDDAKALDEVVVIGYGTAKRKDITGSVATVNAEALTVVPVASA 142
             +QE+ I  ++ ++V+L+ D KAL+EVVV+GYG  K+  +TG++++V A  L  +PV   
Sbjct: 97   TSQEVQINNRATVNVSLAPDTKALEEVVVVGYGEQKKSVVTGAISSVKASDLDNMPVTRV 156

Query: 143  TEALTGKMAGVQITTTEGSPDAEMKIRVRGG---GSITGDNTPLFIVDGFPVE-SISDIP 198
             +AL G+ +G+ IT+  G P +   +RVRG    G    D+ PL++VDG P++  I  + 
Sbjct: 157  EQALQGRASGLTITSNSGQPGSPATVRVRGTTTIGKNPEDSDPLYVVDGVPIDGGIDYLN 216

Query: 199  ASDIEDMTVLKDASSTAIYGSRGANGVILVTTKSGKEGKISVNYNAYYSWKKMAKQLNTL 258
             SDI  + VLKDA+S AIYG+R ANGVILVTTK G  GK+ V+YN YY  ++  ++L+ L
Sbjct: 217  QSDIASIEVLKDAASAAIYGTRAANGVILVTTKRGTSGKMQVSYNGYYGVQEPWRKLDLL 276

Query: 259  SSGDYAKWQYELAMLNSGKHDTINPDDYTKVFGNYQDIDLYENIEGNNWQDQVFGRTGHT 318
            ++ +YA    E ++   G     NP D                 EG +WQ+ VF      
Sbjct: 277  NAREYATLYNEASVAGGGAIKYPNPQDLG---------------EGTDWQEAVFSDNSPI 321

Query: 319  FNHNLSINGGSDKTKFAFSYAHMDDKAIMQDSDFKRDNLSLKVN--HKPNKRVALDFSVR 376
             NH LS++GG +K+ F  S+ + + + I+  S+ + +  + + N  HK  K +    ++ 
Sbjct: 322  QNHELSVSGGGEKSTFYTSFGYFNQEGIVAPSNSQYERFTARFNSTHKVTKAITFGNNIG 381

Query: 377  YSNTTINGAGANESKSEVSSADSRMKDVMIYTPFNFKD----LSDGYDPDL--------- 423
            Y  T I+  G  E  SE  +  +R  ++   TP    D     +  YD  +         
Sbjct: 382  Y--TRISSVGV-EPNSEWGAPLTRAINMDPLTPLIETDPEKANASPYDKAVVRDPQGRPY 438

Query: 424  --------QLTNPLVSVADNARQQSRQTFNYNGSFTWEFIDNLKFKTEFGLDHYYNKDKR 475
                    ++ NP+ ++  + R+        N     E +  L+ ++  G D  +  D  
Sbjct: 439  GISNNISSEIVNPVAALLVDQRRGWSDKVVGNAFVEIEPLAGLRLRSSIGADLAFWGDHN 498

Query: 476  FYGVTTYNSRINGNNQPIAVFTSKERKTFRNTNTLNYDFKKILKNK----DHSLSLLVGQ 531
            F  V  Y +  N N Q           T  N   LN+ ++           H+ +LLVG 
Sbjct: 499  FSPV-FYLNTTNNNTQ--------NDYTRNNNRGLNWLWEATAAYTRSFGRHNATLLVGT 549

Query: 532  ELIKVKSNTDTDEVRFYP--KLFTADQAFNLSSQGTAFSTDKFYNADDILLSYFARANYD 589
               K K  T        P   L  A  AF++ ++   F   ++ N    L S F R NY+
Sbjct: 550  SAQKNKGETQGGTKSGIPVSHLDDASLAFSVPTEDQFFWGGEYQNT---LSSIFGRVNYN 606

Query: 590  FQGKYLASATFRADGSSKFSKDNRWGFFPSAALAWRMSSENFMESTKSWLDDLKLRISYG 649
            +  +YL +   R DGSSKF  +N++G FPS ++ W  S E+F  +    ++ LK+R SYG
Sbjct: 607  YDERYLLTGIIRRDGSSKFGPNNKYGVFPSVSVGWVTSRESFFPA-NDIVNFLKIRGSYG 665

Query: 650  TAGNNNIPSDQTSTIWSAGSGASIGWMNNMSSY-WTTGAQMANPDLKWETTHTRNAGLDF 708
              GNN I           G   +IG+  ++      +   ++NPDL+WE T   N G + 
Sbjct: 666  VVGNNRIDDFLYLARVGGGRNYTIGYGPDLELVNGVSPEALSNPDLQWEETSQLNFGFEA 725

Query: 709  TLLNGKLSGTVEYYWNTTKDLLINFPVSG-VGYSFQYRNLGETENKGWEVTLNWNAINKK 767
             L +   + T EYY   T D+L+   +   VG +  Y N+ E EN+G+EV L +N     
Sbjct: 726  VLFS-DFTLTAEYYKKKTSDMLLQTTIPWYVGNNGPYGNIAEMENRGFEVELGYNK-TIG 783

Query: 768  NYALSFNANVGFNKNKVKSLGSLMDYSADSGWASTDIQSDFKVQPGHSVGEIYGFVSDGR 827
              A S N N  + +N+V SLG   ++     +  +  +   +++ G  +  +YG  +DG 
Sbjct: 784  QVAFSLNGNASYLENEVTSLGPEKEFLNRQVFGPSG-EVITRIEVGKPINFLYGLKNDGI 842

Query: 828  YEVSDFEGFIDGKWVLKAGVADASDIIGEKYLRPGAMKLKNVDGSEDNKVTKDDQKVIGD 887
            ++  +          +   V    +++  K  +PG  +  +V+G  D  +  DD+ +IGD
Sbjct: 843  FQNEE---------EIATYVNSEGEMLQPK-AQPGDFRRVDVNG--DGVINSDDRTMIGD 890

Query: 888  TNPFCSGGFSVNARVYGFDLTANFTYSIGNDIYNANKIEYTSSSKYKYRNMIDVMAEEKR 947
              P  + GF+ +A+   FDL        GND++ A +       +Y  +          R
Sbjct: 891  PTPDWTYGFTASAKWKSFDLMVFGQGVAGNDVFQAIR-------RYDLQGANWTTEVFGR 943

Query: 948  WTNLNADGTICNDPTQLAAMNANTSMWSPWTQKYVLTDWAVEDGSFLRLATLSIGYTLPQ 1007
            W     +GT  N   +L+  +AN +  S        +D+ V+DGS+ R+  L +GY+LPQ
Sbjct: 944  WA---GEGT-SNTFPRLSFNDANKNFSSS-------SDFYVKDGSYFRIKVLQLGYSLPQ 992

Query: 1008 TLTRKVGIQNLRFYATGYNLFCITNYSGFDPEVSTRTKSALTPGVDYSAYPRSRQYVIGL 1067
             L  KVG+  LR Y TG NLF  TNY+G+DPE+   +      GVD   YP++R Y+ G+
Sbjct: 993  NLISKVGLSRLRVYVTGNNLFTFTNYTGYDPEIGGGSF-----GVDRGIYPQARAYMAGI 1047

Query: 1068 NLTF 1071
            N+ F
Sbjct: 1048 NIGF 1051